BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4120.1
(150 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16715.1 | protein EMBRYO DEFECTIVE 2247 | Chr5:5485353-54932... 185 8e-55
AT1G14610.1 | valyl-tRNA synthetase / valine-tRNA ligase (VALRS)... 99 9e-25
AT5G49030.3 | tRNA synthetase class I (I%2C L%2C M and V) family... 55 3e-09
AT5G49030.1 | tRNA synthetase class I (I%2C L%2C M and V) family... 55 3e-09
AT5G49030.2 | tRNA synthetase class I (I%2C L%2C M and V) family... 54 4e-09
>AT5G16715.1 | protein EMBRYO DEFECTIVE 2247 | Chr5:5485353-5493229
FORWARD LENGTH=974 | 201606
Length = 974
Score = 185 bits (469), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 94/136 (69%), Positives = 106/136 (77%)
Query: 14 SVYKLNPLIFSRHGRTKFSISYRNFIRSRRTRFCTVAALDNGAFTTPLTTKSFDFTSEER 73
S ++LN L F+R R S S N I S+R + AA N FT+P T+K+FDF+SEE+
Sbjct: 21 SPHQLNTLFFTRRRRRLISPSRLNSIFSQRRFSFSAAASGNNVFTSPETSKTFDFSSEEK 80
Query: 74 IYTWWESQGYFKPNPDQDGDAFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMKGRPT 133
IY WWESQGYFKPN DQ G FVI MPPPNVTGSLHMGHAMFVTLEDIMVRYNRM GRPT
Sbjct: 81 IYKWWESQGYFKPNFDQGGSPFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMNGRPT 140
Query: 134 LWLPGTDHAGIATQVI 149
LWLPGTDHAGIATQ++
Sbjct: 141 LWLPGTDHAGIATQLV 156
>AT1G14610.1 | valyl-tRNA synthetase / valine-tRNA ligase (VALRS) |
Chr1:5008502-5014486 REVERSE LENGTH=1108 | 201606
Length = 1108
Score = 99.4 bits (246), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 54/81 (66%)
Query: 69 TSEERIYTWWESQGYFKPNPDQDGDAFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYNRM 128
T E+ Y WWE FK + FVI +PPPNVTG+LH+GHA+ +ED ++R+ RM
Sbjct: 144 TVEKSWYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRM 203
Query: 129 KGRPTLWLPGTDHAGIATQVI 149
G LW+PG DHAGIATQV+
Sbjct: 204 SGYNALWVPGVDHAGIATQVV 224
>AT5G49030.3 | tRNA synthetase class I (I%2C L%2C M and V) family
protein | Chr5:19875091-19883251 REVERSE LENGTH=1279 |
201606
Length = 1279
Score = 55.1 bits (131), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 68 FTSEERIYTWWESQGYFKPNPDQD-GDAFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYN 126
T E + WE FK D + G +F++ PP G LHMGHA+ L+DI+ RY
Sbjct: 306 LTREPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYK 365
Query: 127 RMKGRPTLWLPGTDHAGIATQV 148
++ ++PG D G+ ++
Sbjct: 366 LLQNYKVQYVPGWDCHGLPIEL 387
>AT5G49030.1 | tRNA synthetase class I (I%2C L%2C M and V) family
protein | Chr5:19875091-19882291 REVERSE LENGTH=1093 |
201606
Length = 1093
Score = 54.7 bits (130), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 68 FTSEERIYTWWESQGYFKPNPDQD-GDAFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYN 126
T E + WE FK D + G +F++ PP G LHMGHA+ L+DI+ RY
Sbjct: 120 LTREPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYK 179
Query: 127 RMKGRPTLWLPGTDHAGIATQV 148
++ ++PG D G+ ++
Sbjct: 180 LLQNYKVQYVPGWDCHGLPIEL 201
>AT5G49030.2 | tRNA synthetase class I (I%2C L%2C M and V) family
protein | Chr5:19876365-19882291 REVERSE LENGTH=955 |
201606
Length = 955
Score = 54.3 bits (129), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 68 FTSEERIYTWWESQGYFKPNPDQD-GDAFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYN 126
T E + WE FK D + G +F++ PP G LHMGHA+ L+DI+ RY
Sbjct: 120 LTREPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYK 179
Query: 127 RMKGRPTLWLPGTDHAGIATQV 148
++ ++PG D G+ ++
Sbjct: 180 LLQNYKVQYVPGWDCHGLPIEL 201