BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4170.1
(578 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G04310.3 | Pectin lyase-like superfamily protein | Chr5:12051... 501 e-174
AT5G04310.2 | Pectin lyase-like superfamily protein | Chr5:12033... 500 e-173
AT5G04310.1 | Pectin lyase-like superfamily protein | Chr5:12033... 500 e-173
AT4G13710.1 | Pectin lyase-like superfamily protein | Chr4:79625... 471 e-162
AT4G13710.2 | Pectin lyase-like superfamily protein | Chr4:79625... 469 e-162
>AT5G04310.3 | Pectin lyase-like superfamily protein |
Chr5:1205130-1207352 REVERSE LENGTH=475 | 201606
Length = 475
Score = 501 bits (1289), Expect = e-174, Method: Compositional matrix adjust.
Identities = 258/437 (59%), Positives = 307/437 (70%), Gaps = 31/437 (7%)
Query: 5 IRLLLLLLLSFISTVIIIEATHYNLTLPYQHLDPESVVQELQRSASYFKGRVTSDLLKSL 64
I LL+ LS A+ +NL+LP+QH PE VV +QR
Sbjct: 20 IWFCLLVSLSHHGRASSTSASIFNLSLPHQHPFPEHVVLNVQR----------------- 62
Query: 65 TFRRLNISILSRREIL--EKKDQSTS-------LTGNPIDDCWRKDPKWQTNLQLLADCG 115
+LN S LSRR++L ++ D +T+ +TGNPIDDCWR DP W N Q LADC
Sbjct: 63 ---KLNDS-LSRRQLLTYQQDDGTTASSPIPSCITGNPIDDCWRCDPNWSANRQRLADCS 118
Query: 116 IGFGKNALGGKGGQFYVITDSSDKDTQNPAPGTLRHAVIQTEPLWIIFSKQMSIKLQAVL 175
IGFG+ LGGKGGQFY++TDSSD D NP PGTLRHAVIQ EPLWIIFS M IKL+ L
Sbjct: 119 IGFGQGTLGGKGGQFYLVTDSSDNDAANPIPGTLRHAVIQPEPLWIIFSSDMGIKLKHEL 178
Query: 176 YINSFKTIDGRGFDIHIT-NGCIVLQSVSNIIIHNIHVHNCVPTGETNIRSSPTKNIFYG 234
I S+KTIDGRG +I IT +GC+ +Q VS++IIHN+H+H+C P+G T + SSPT F G
Sbjct: 179 IIGSYKTIDGRGTNIQITGHGCLTIQQVSHVIIHNVHIHHCKPSGNTLVASSPTHVGFRG 238
Query: 235 KSEGDGISIRNGTNIWIDHCSLSYCTDGLIDVTLGSTLVTISNNYFSHHDKVMLFGHSDK 294
S+GDGIS+ +IW+DHCSL YC DGLIDV L ST VTISNNYFSHHD+VML GH D+
Sbjct: 239 VSDGDGISVSASHHIWVDHCSLGYCADGLIDVILASTAVTISNNYFSHHDEVMLLGHDDR 298
Query: 295 YFQDNSMQVTVAFNRFGEALVQRMPRCRHGYFHIVNNDYTEWGFYAIGGSANPTINSQGN 354
Y D MQVT+AFN FGE LVQRMPRCRHGY H+VNND+T W YAIGGSA+PTINSQGN
Sbjct: 299 YTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSASPTINSQGN 358
Query: 355 RYTAPSSRNLKEVTRRMSKSEKEWKSWNWKSEGDMMVNGAFFVASGSGAAQEYAKASSFN 414
RYTAP N KEVT+R+ +EK W WNW++EGD+MVNGAFFV SG G + YA+A+S
Sbjct: 359 RYTAPIDPNAKEVTKRVDSNEKHWSGWNWRTEGDVMVNGAFFVPSGDGVSPAYARATSVQ 418
Query: 415 PVPPKYIDQLTKNAGVF 431
P IDQLT NAGVF
Sbjct: 419 PKAAAIIDQLTVNAGVF 435
>AT5G04310.2 | Pectin lyase-like superfamily protein |
Chr5:1203356-1207352 REVERSE LENGTH=518 | 201606
Length = 518
Score = 500 bits (1288), Expect = e-173, Method: Compositional matrix adjust.
Identities = 258/437 (59%), Positives = 307/437 (70%), Gaps = 31/437 (7%)
Query: 5 IRLLLLLLLSFISTVIIIEATHYNLTLPYQHLDPESVVQELQRSASYFKGRVTSDLLKSL 64
I LL+ LS A+ +NL+LP+QH PE VV +QR
Sbjct: 20 IWFCLLVSLSHHGRASSTSASIFNLSLPHQHPFPEHVVLNVQR----------------- 62
Query: 65 TFRRLNISILSRREIL--EKKDQSTS-------LTGNPIDDCWRKDPKWQTNLQLLADCG 115
+LN S LSRR++L ++ D +T+ +TGNPIDDCWR DP W N Q LADC
Sbjct: 63 ---KLNDS-LSRRQLLTYQQDDGTTASSPIPSCITGNPIDDCWRCDPNWSANRQRLADCS 118
Query: 116 IGFGKNALGGKGGQFYVITDSSDKDTQNPAPGTLRHAVIQTEPLWIIFSKQMSIKLQAVL 175
IGFG+ LGGKGGQFY++TDSSD D NP PGTLRHAVIQ EPLWIIFS M IKL+ L
Sbjct: 119 IGFGQGTLGGKGGQFYLVTDSSDNDAANPIPGTLRHAVIQPEPLWIIFSSDMGIKLKHEL 178
Query: 176 YINSFKTIDGRGFDIHIT-NGCIVLQSVSNIIIHNIHVHNCVPTGETNIRSSPTKNIFYG 234
I S+KTIDGRG +I IT +GC+ +Q VS++IIHN+H+H+C P+G T + SSPT F G
Sbjct: 179 IIGSYKTIDGRGTNIQITGHGCLTIQQVSHVIIHNVHIHHCKPSGNTLVASSPTHVGFRG 238
Query: 235 KSEGDGISIRNGTNIWIDHCSLSYCTDGLIDVTLGSTLVTISNNYFSHHDKVMLFGHSDK 294
S+GDGIS+ +IW+DHCSL YC DGLIDV L ST VTISNNYFSHHD+VML GH D+
Sbjct: 239 VSDGDGISVSASHHIWVDHCSLGYCADGLIDVILASTAVTISNNYFSHHDEVMLLGHDDR 298
Query: 295 YFQDNSMQVTVAFNRFGEALVQRMPRCRHGYFHIVNNDYTEWGFYAIGGSANPTINSQGN 354
Y D MQVT+AFN FGE LVQRMPRCRHGY H+VNND+T W YAIGGSA+PTINSQGN
Sbjct: 299 YTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSASPTINSQGN 358
Query: 355 RYTAPSSRNLKEVTRRMSKSEKEWKSWNWKSEGDMMVNGAFFVASGSGAAQEYAKASSFN 414
RYTAP N KEVT+R+ +EK W WNW++EGD+MVNGAFFV SG G + YA+A+S
Sbjct: 359 RYTAPIDPNAKEVTKRVDSNEKHWSGWNWRTEGDVMVNGAFFVPSGDGVSPAYARATSVQ 418
Query: 415 PVPPKYIDQLTKNAGVF 431
P IDQLT NAGVF
Sbjct: 419 PKAAAIIDQLTVNAGVF 435
>AT5G04310.1 | Pectin lyase-like superfamily protein |
Chr5:1203356-1207352 REVERSE LENGTH=518 | 201606
Length = 518
Score = 500 bits (1288), Expect = e-173, Method: Compositional matrix adjust.
Identities = 258/437 (59%), Positives = 307/437 (70%), Gaps = 31/437 (7%)
Query: 5 IRLLLLLLLSFISTVIIIEATHYNLTLPYQHLDPESVVQELQRSASYFKGRVTSDLLKSL 64
I LL+ LS A+ +NL+LP+QH PE VV +QR
Sbjct: 20 IWFCLLVSLSHHGRASSTSASIFNLSLPHQHPFPEHVVLNVQR----------------- 62
Query: 65 TFRRLNISILSRREIL--EKKDQSTS-------LTGNPIDDCWRKDPKWQTNLQLLADCG 115
+LN S LSRR++L ++ D +T+ +TGNPIDDCWR DP W N Q LADC
Sbjct: 63 ---KLNDS-LSRRQLLTYQQDDGTTASSPIPSCITGNPIDDCWRCDPNWSANRQRLADCS 118
Query: 116 IGFGKNALGGKGGQFYVITDSSDKDTQNPAPGTLRHAVIQTEPLWIIFSKQMSIKLQAVL 175
IGFG+ LGGKGGQFY++TDSSD D NP PGTLRHAVIQ EPLWIIFS M IKL+ L
Sbjct: 119 IGFGQGTLGGKGGQFYLVTDSSDNDAANPIPGTLRHAVIQPEPLWIIFSSDMGIKLKHEL 178
Query: 176 YINSFKTIDGRGFDIHIT-NGCIVLQSVSNIIIHNIHVHNCVPTGETNIRSSPTKNIFYG 234
I S+KTIDGRG +I IT +GC+ +Q VS++IIHN+H+H+C P+G T + SSPT F G
Sbjct: 179 IIGSYKTIDGRGTNIQITGHGCLTIQQVSHVIIHNVHIHHCKPSGNTLVASSPTHVGFRG 238
Query: 235 KSEGDGISIRNGTNIWIDHCSLSYCTDGLIDVTLGSTLVTISNNYFSHHDKVMLFGHSDK 294
S+GDGIS+ +IW+DHCSL YC DGLIDV L ST VTISNNYFSHHD+VML GH D+
Sbjct: 239 VSDGDGISVSASHHIWVDHCSLGYCADGLIDVILASTAVTISNNYFSHHDEVMLLGHDDR 298
Query: 295 YFQDNSMQVTVAFNRFGEALVQRMPRCRHGYFHIVNNDYTEWGFYAIGGSANPTINSQGN 354
Y D MQVT+AFN FGE LVQRMPRCRHGY H+VNND+T W YAIGGSA+PTINSQGN
Sbjct: 299 YTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSASPTINSQGN 358
Query: 355 RYTAPSSRNLKEVTRRMSKSEKEWKSWNWKSEGDMMVNGAFFVASGSGAAQEYAKASSFN 414
RYTAP N KEVT+R+ +EK W WNW++EGD+MVNGAFFV SG G + YA+A+S
Sbjct: 359 RYTAPIDPNAKEVTKRVDSNEKHWSGWNWRTEGDVMVNGAFFVPSGDGVSPAYARATSVQ 418
Query: 415 PVPPKYIDQLTKNAGVF 431
P IDQLT NAGVF
Sbjct: 419 PKAAAIIDQLTVNAGVF 435
>AT4G13710.1 | Pectin lyase-like superfamily protein |
Chr4:7962550-7966012 FORWARD LENGTH=470 | 201606
Length = 470
Score = 471 bits (1211), Expect = e-162, Method: Compositional matrix adjust.
Identities = 205/345 (59%), Positives = 260/345 (75%), Gaps = 1/345 (0%)
Query: 90 TGNPIDDCWRKDPKWQTNLQLLADCGIGFGKNALGGKGGQFYVITDSSDKDTQNPAPGTL 149
TGNPIDDCWR D W N + LADCGIGFG+NA+GG+ G+FY++TD +D+D NP PGTL
Sbjct: 120 TGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTL 179
Query: 150 RHAVIQTEPLWIIFSKQMSIKLQAVLYINSFKTIDGRGFDIHITNG-CIVLQSVSNIIIH 208
RHAVIQ EPLWI+F + M I+L+ L +NSFKTID RG ++HI NG CI +Q ++N+IIH
Sbjct: 180 RHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIH 239
Query: 209 NIHVHNCVPTGETNIRSSPTKNIFYGKSEGDGISIRNGTNIWIDHCSLSYCTDGLIDVTL 268
+H+H+C PTG +RSSP+ + ++GD +SI ++IWIDH SLS+C DGL+D +
Sbjct: 240 GLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVM 299
Query: 269 GSTLVTISNNYFSHHDKVMLFGHSDKYFQDNSMQVTVAFNRFGEALVQRMPRCRHGYFHI 328
GST +T+SNN+F+HH++VML GHSD Y +D MQVT+A+N FGE LVQRMPRCRHGYFH+
Sbjct: 300 GSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHV 359
Query: 329 VNNDYTEWGFYAIGGSANPTINSQGNRYTAPSSRNLKEVTRRMSKSEKEWKSWNWKSEGD 388
VNNDYT W YAIGGSA PTINSQGNRY AP R KEVT+R+ EWK WNW+SEGD
Sbjct: 360 VNNDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGD 419
Query: 389 MMVNGAFFVASGSGAAQEYAKASSFNPVPPKYIDQLTKNAGVFLC 433
+++NGAFF SG+GA+ Y +ASS P +D +T AG C
Sbjct: 420 LLLNGAFFRPSGAGASASYGRASSLAAKPSSMVDTITSTAGALGC 464
>AT4G13710.2 | Pectin lyase-like superfamily protein |
Chr4:7962550-7966012 FORWARD LENGTH=451 | 201606
Length = 451
Score = 469 bits (1208), Expect = e-162, Method: Compositional matrix adjust.
Identities = 205/345 (59%), Positives = 260/345 (75%), Gaps = 1/345 (0%)
Query: 90 TGNPIDDCWRKDPKWQTNLQLLADCGIGFGKNALGGKGGQFYVITDSSDKDTQNPAPGTL 149
TGNPIDDCWR D W N + LADCGIGFG+NA+GG+ G+FY++TD +D+D NP PGTL
Sbjct: 101 TGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTL 160
Query: 150 RHAVIQTEPLWIIFSKQMSIKLQAVLYINSFKTIDGRGFDIHITNG-CIVLQSVSNIIIH 208
RHAVIQ EPLWI+F + M I+L+ L +NSFKTID RG ++HI NG CI +Q ++N+IIH
Sbjct: 161 RHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIH 220
Query: 209 NIHVHNCVPTGETNIRSSPTKNIFYGKSEGDGISIRNGTNIWIDHCSLSYCTDGLIDVTL 268
+H+H+C PTG +RSSP+ + ++GD +SI ++IWIDH SLS+C DGL+D +
Sbjct: 221 GLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVM 280
Query: 269 GSTLVTISNNYFSHHDKVMLFGHSDKYFQDNSMQVTVAFNRFGEALVQRMPRCRHGYFHI 328
GST +T+SNN+F+HH++VML GHSD Y +D MQVT+A+N FGE LVQRMPRCRHGYFH+
Sbjct: 281 GSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHV 340
Query: 329 VNNDYTEWGFYAIGGSANPTINSQGNRYTAPSSRNLKEVTRRMSKSEKEWKSWNWKSEGD 388
VNNDYT W YAIGGSA PTINSQGNRY AP R KEVT+R+ EWK WNW+SEGD
Sbjct: 341 VNNDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGD 400
Query: 389 MMVNGAFFVASGSGAAQEYAKASSFNPVPPKYIDQLTKNAGVFLC 433
+++NGAFF SG+GA+ Y +ASS P +D +T AG C
Sbjct: 401 LLLNGAFFRPSGAGASASYGRASSLAAKPSSMVDTITSTAGALGC 445