BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4280.1
(72 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25315.2 | Expressed protein | Chr4:12951659-12952834 REVERSE... 97 7e-28
AT4G25315.1 | Expressed protein | Chr4:12951659-12952834 REVERSE... 84 1e-22
AT4G25315.3 | Expressed protein | Chr4:12951659-12952450 REVERSE... 66 6e-16
>AT4G25315.2 | Expressed protein | Chr4:12951659-12952834 REVERSE
LENGTH=108 | 201606
Length = 108
Score = 96.7 bits (239), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%)
Query: 7 EGSEAARPKLSCMKCFDALGFCYSPVYQMQQYYRLGALDNCSEKWSALFDCLNLKTKRHA 66
E S + R ++SC KCFDAL FCYSP YQMQQYYR+G LD+C++K+S LFDCL+LKTKR +
Sbjct: 6 EDSSSVRRRVSCTKCFDALWFCYSPFYQMQQYYRVGKLDDCTKKFSDLFDCLSLKTKRAS 65
Query: 67 EAEVGL 72
EAE L
Sbjct: 66 EAERIL 71
>AT4G25315.1 | Expressed protein | Chr4:12951659-12952834 REVERSE
LENGTH=127 | 201606
Length = 127
Score = 84.0 bits (206), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 19/82 (23%)
Query: 7 EGSEAARPKLSCMKCFDALGFCY-------------------SPVYQMQQYYRLGALDNC 47
E S + R ++SC KCFDAL FCY +P YQMQQYYR+G LD+C
Sbjct: 6 EDSSSVRRRVSCTKCFDALWFCYWMSRWSNITSNGDDTGNDLAPFYQMQQYYRVGKLDDC 65
Query: 48 SEKWSALFDCLNLKTKRHAEAE 69
++K+S LFDCL+LKTKR +EAE
Sbjct: 66 TKKFSDLFDCLSLKTKRASEAE 87
>AT4G25315.3 | Expressed protein | Chr4:12951659-12952450 REVERSE
LENGTH=98 | 201606
Length = 98
Score = 66.2 bits (160), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 23 DALGFCYSPVYQMQQYYRLGALDNCSEKWSALFDCLNLKTKRHAEAE 69
D G +P YQMQQYYR+G LD+C++K+S LFDCL+LKTKR +EAE
Sbjct: 12 DDTGNDLAPFYQMQQYYRVGKLDDCTKKFSDLFDCLSLKTKRASEAE 58