BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4290.1
(103 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04480.1 | endoribonuclease | Chr3:1193988-1197320 REVERSE LE... 74 1e-16
>AT3G04480.1 | endoribonuclease | Chr3:1193988-1197320 REVERSE
LENGTH=718 | 201606
Length = 718
Score = 74.3 bits (181), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Query: 1 MKLCGGGATEEMEQ--ENAEAVSKSFNCSIASSAILFVIYCSASLECSEKSQLHEKFKSF 58
M L GA E+ Q N+EA+++SFNCSI+SSAILFV++CSA + SE++QLHEKF +F
Sbjct: 454 MNLQTEGAIAELNQALTNSEAIAESFNCSISSSAILFVVFCSARTKQSERNQLHEKFVTF 513
Query: 59 LDQKRSSELDCASELLEPIF 78
L +SS +L+P+F
Sbjct: 514 LGLAKSSRR--VQNVLDPMF 531