BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4410.1
(340 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G22850.1 | SNARE associated Golgi protein family | Chr1:80806... 407 e-142
AT1G22850.2 | SNARE associated Golgi protein family | Chr1:80811... 374 e-130
AT1G03260.1 | SNARE associated Golgi protein family | Chr1:79567... 99 9e-24
AT5G19070.1 | SNARE associated Golgi protein family | Chr5:63755... 85 1e-18
AT5G19070.2 | SNARE associated Golgi protein family | Chr5:63755... 78 2e-16
>AT1G22850.1 | SNARE associated Golgi protein family |
Chr1:8080671-8082816 REVERSE LENGTH=344 | 201606
Length = 344
Score = 407 bits (1045), Expect = e-142, Method: Compositional matrix adjust.
Identities = 221/293 (75%), Positives = 247/293 (84%), Gaps = 7/293 (2%)
Query: 41 KRFHFFKPCISSLRESKKQTL--PKTSNIPQSLRRFGSPKKDGDDDDKDNDNSTSEKQKS 98
KRFHF KPC S + KK+ P T+ PQSLR F + K D++D+D+ S S+
Sbjct: 40 KRFHFLKPCSSLKQTKKKKQQSLPSTAPPPQSLRWFFNSKSTNDENDEDDVKSESD---- 95
Query: 99 VSDSSFDNGNAVKGTILAGLLLVGVVGGFATVGYVYKDQINTFLTQFSGFIEGYGTAGYA 158
D + A+KGTILAG+LL+G VGGFA VGYVY+DQINTFLTQFS +IEGYGTAGYA
Sbjct: 96 -DDGGSEGDAAIKGTILAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGYA 154
Query: 159 LFVAVYAGLEVLAIPAIPLTMSAGLLFGSFTGTILVSISGTVAATIAFLIARYFARERIL 218
LF+AVYAGLE+LAIPA+PLTMSAGLLFG GTI+VSISGT+AA++AFLIARYFARERIL
Sbjct: 155 LFIAVYAGLEILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERIL 214
Query: 219 KLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGM 278
KLVE NKKFLAIDKAIGENGF+VVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGM
Sbjct: 215 KLVEDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGM 274
Query: 279 LPGTWAYVSAGAFGRAIIQEESEVGLPGGNGQLVTLGLGLLATALAAAYVTQL 331
LPG+WAYVSAGAFGRAIIQEES VGLPGGNGQL+TLG+GLL TALA YVT L
Sbjct: 275 LPGSWAYVSAGAFGRAIIQEESNVGLPGGNGQLLTLGVGLLVTALAGTYVTSL 327
>AT1G22850.2 | SNARE associated Golgi protein family |
Chr1:8081181-8082816 REVERSE LENGTH=298 | 201606
Length = 298
Score = 374 bits (960), Expect = e-130, Method: Compositional matrix adjust.
Identities = 194/263 (73%), Positives = 220/263 (83%), Gaps = 7/263 (2%)
Query: 41 KRFHFFKPCISSLRESKKQTL--PKTSNIPQSLRRFGSPKKDGDDDDKDNDNSTSEKQKS 98
KRFHF KPC S + KK+ P T+ PQSLR F + K D++D+D+ S S+
Sbjct: 40 KRFHFLKPCSSLKQTKKKKQQSLPSTAPPPQSLRWFFNSKSTNDENDEDDVKSESD---- 95
Query: 99 VSDSSFDNGNAVKGTILAGLLLVGVVGGFATVGYVYKDQINTFLTQFSGFIEGYGTAGYA 158
D + A+KGTILAG+LL+G VGGFA VGYVY+DQINTFLTQFS +IEGYGTAGYA
Sbjct: 96 -DDGGSEGDAAIKGTILAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGYA 154
Query: 159 LFVAVYAGLEVLAIPAIPLTMSAGLLFGSFTGTILVSISGTVAATIAFLIARYFARERIL 218
LF+AVYAGLE+LAIPA+PLTMSAGLLFG GTI+VSISGT+AA++AFLIARYFARERIL
Sbjct: 155 LFIAVYAGLEILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERIL 214
Query: 219 KLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGM 278
KLVE NKKFLAIDKAIGENGF+VVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGM
Sbjct: 215 KLVEDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGM 274
Query: 279 LPGTWAYVSAGAFGRAIIQEESE 301
LPG+WAYVSAGAFGRAII+ + E
Sbjct: 275 LPGSWAYVSAGAFGRAIIEIDIE 297
>AT1G03260.1 | SNARE associated Golgi protein family |
Chr1:795678-798102 REVERSE LENGTH=274 | 201606
Length = 274
Score = 99.0 bits (245), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 5/172 (2%)
Query: 118 LLLVGVVGGFATVGYVYKDQINTFLTQFSGFIEGYGTAGYALFVAVYAGLEVLAIPAIPL 177
LLLV +V A + + ++ FL + +G AL Y L ++A+PA L
Sbjct: 18 LLLVAIVS--AVIFLPVEQKLKDFLLWIKEDLGPFGPLALAL---AYIPLTIVAVPASVL 72
Query: 178 TMSAGLLFGSFTGTILVSISGTVAATIAFLIARYFARERILKLVEGNKKFLAIDKAIGEN 237
T+ G LFG G + S+ T+ AT AFL+ R + + ++ KF A+ AI ++
Sbjct: 73 TLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAIQKS 132
Query: 238 GFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAG 289
GFK+V LLR+ P+LPF++ NYL +T V+ Y+L +WLGM+P T+A V G
Sbjct: 133 GFKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVG 184
>AT5G19070.1 | SNARE associated Golgi protein family |
Chr5:6375569-6377470 FORWARD LENGTH=280 | 201606
Length = 280
Score = 84.7 bits (208), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 132/240 (55%), Gaps = 17/240 (7%)
Query: 103 SFDNGNAVKGTILAGLLLVGVVGGFATVGYVYKDQINTFLTQFSGFIE-GYGTAG-YALF 160
+F G+A++ ++L L+LV A V Y + L F ++E G G +AL
Sbjct: 2 AFTWGSALRISVL--LILVA-----AIVLACYFLPVEKLLKDFLLWVEQDLGPWGPFALA 54
Query: 161 VAVYAGLEVLAIPAIPLTMSAGLLFGSFTGTILVSISGTVAATIAFLIARYFARERILKL 220
VA Y L VLA+PA LT+ G LFG G + S+ T+ + AFL+ R + ++
Sbjct: 55 VA-YIPLTVLAVPASVLTLGGGYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAK 113
Query: 221 VEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLP 280
++ +F ++ AI ++GFK+ LLRL+PLLPFS+ NYL +T ++ PY+L SWLGM+P
Sbjct: 114 LKDYPQFQSVALAIEKSGFKICLLLRLAPLLPFSMLNYLLSVTPIRLGPYLLSSWLGMMP 173
Query: 281 GTWAYVSAGAFGR---AIIQEESEVGLPGGNGQLVTLGLGLLATALAAAYVTQLAKDAVK 337
T A V G + + + SE PG L++ L+ + + VT++AKDA++
Sbjct: 174 ITLALVYVGTTLKDLSDVTHKWSEFS-PGRWAFLIS---SLVISVILMVCVTKVAKDALR 229
>AT5G19070.2 | SNARE associated Golgi protein family |
Chr5:6375569-6377155 FORWARD LENGTH=232 | 201606
Length = 232
Score = 77.8 bits (190), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 10/189 (5%)
Query: 103 SFDNGNAVKGTILAGLLLVGVVGGFATVGYVYKDQINTFLTQFSGFIE-GYGTAG-YALF 160
+F G+A++ ++L L+LV A V Y + L F ++E G G +AL
Sbjct: 2 AFTWGSALRISVL--LILVA-----AIVLACYFLPVEKLLKDFLLWVEQDLGPWGPFALA 54
Query: 161 VAVYAGLEVLAIPAIPLTMSAGLLFGSFTGTILVSISGTVAATIAFLIARYFARERILKL 220
VA Y L VLA+PA LT+ G LFG G + S+ T+ + AFL+ R + ++
Sbjct: 55 VA-YIPLTVLAVPASVLTLGGGYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAK 113
Query: 221 VEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLP 280
++ +F ++ AI ++GFK+ LLRL+PLLPFS+ NYL +T ++ PY+L SWLGM+P
Sbjct: 114 LKDYPQFQSVALAIEKSGFKICLLLRLAPLLPFSMLNYLLSVTPIRLGPYLLSSWLGMMP 173
Query: 281 GTWAYVSAG 289
T A V G
Sbjct: 174 ITLALVYVG 182