BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4430.1
(255 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G50910.1 | hypothetical protein | Chr1:18867083-18869839 REVE... 97 1e-22
AT1G50910.2 | hypothetical protein | Chr1:18867083-18868914 REVE... 90 1e-20
>AT1G50910.1 | hypothetical protein | Chr1:18867083-18869839 REVERSE
LENGTH=500 | 201606
Length = 500
Score = 96.7 bits (239), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 88/118 (74%), Gaps = 8/118 (6%)
Query: 1 MGFSLTILALLARLRVLVQQILLDVVSVFNMVSSISQKEHSVKLSRGGIEVFREYYPSKE 60
+GFS+T LALLARLRVLVQQILLD VSVFN V+S S K+ SVK+++ G+EVFRE+YP +E
Sbjct: 135 IGFSVTFLALLARLRVLVQQILLDAVSVFNSVTSTSLKKQSVKIAQDGVEVFREFYPKEE 194
Query: 61 EFIT-LECVWEKDKFILL------EKSKPVDRDCGVEELPLRPSKIEYRSIEAFLGVD 111
E +T L+CVW+ DK++LL E SKP++++ E++ R S ++Y++ + L D
Sbjct: 195 ECVTLLDCVWKTDKYVLLETLQNSENSKPMEKNVS-EDVTTRDSLVQYQTSVSSLAED 251
>AT1G50910.2 | hypothetical protein | Chr1:18867083-18868914 REVERSE
LENGTH=357 | 201606
Length = 357
Score = 90.1 bits (222), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 70/99 (70%), Gaps = 8/99 (8%)
Query: 20 QILLDVVSVFNMVSSISQKEHSVKLSRGGIEVFREYYPSKEEFIT-LECVWEKDKFILL- 77
QILLD VSVFN V+S S K+ SVK+++ G+EVFRE+YP +EE +T L+CVW+ DK++LL
Sbjct: 11 QILLDAVSVFNSVTSTSLKKQSVKIAQDGVEVFREFYPKEEECVTLLDCVWKTDKYVLLE 70
Query: 78 -----EKSKPVDRDCGVEELPLRPSKIEYRSIEAFLGVD 111
E SKP++++ E++ R S ++Y++ + L D
Sbjct: 71 TLQNSENSKPMEKNVS-EDVTTRDSLVQYQTSVSSLAED 108