BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4500.1
(217 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G10150.1 | Carbohydrate-binding protein | Chr1:3326160-332740... 201 1e-62
AT3G49790.1 | Carbohydrate-binding protein | Chr3:18468296-18469... 177 6e-54
AT1G59510.1 | Carbohydrate-binding protein | Chr1:21859768-21860... 167 3e-50
>AT1G10150.1 | Carbohydrate-binding protein | Chr1:3326160-3327404
FORWARD LENGTH=414 | 201606
Length = 414
Score = 201 bits (510), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 137/171 (80%), Gaps = 4/171 (2%)
Query: 1 MDL-QIMKKGLNFSRRRKKWILLLAAFGVTGYTAYKVYNLPSVVKKRKRLIKLVGALISV 59
MDL ++ +KG+ S+RR+KW++ +A GV+GY AYKVY+LPSV +KRKRL KL GA++SV
Sbjct: 1 MDLLRLREKGIFLSQRRRKWLIFMAISGVSGYGAYKVYHLPSVARKRKRLFKLFGAIVSV 60
Query: 60 IEVVADSSEMIGVVSKDLKVFLQSDSDEIPNSLKQISKIAKSNEFSESLIRVSQALTVGI 119
E+++DS+E + +VS+D+K FL SDSDEIPNSLKQI+KI SNEF++SL RVSQA+T+G
Sbjct: 61 AELISDSAETLSMVSRDVKDFLNSDSDEIPNSLKQIAKITTSNEFTDSLSRVSQAVTIGA 120
Query: 120 LKGYKLGSK-SDNGSQTSYGFS--DRVMDKLFSNAGSGFVSVVVGSFARNL 167
+GYK S D+G + S S DRV+DK+FS AG+GFVSVVVGSFA+NL
Sbjct: 121 FRGYKSESSIGDSGIEKSSDSSVVDRVIDKVFSEAGTGFVSVVVGSFAKNL 171
>AT3G49790.1 | Carbohydrate-binding protein | Chr3:18468296-18469396
REVERSE LENGTH=366 | 201606
Length = 366
Score = 177 bits (448), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 126/169 (74%), Gaps = 14/169 (8%)
Query: 1 MD-LQIMKKG-LNFSRRRKKWILLLAAFGVTGYTAYKVYNLPSVVKKRKRLIKLVGALIS 58
MD L + K+G +F+ + KKWILL V+GY A++VY+ PS+ +KRKR+ KL L++
Sbjct: 1 MDKLGLSKRGYFDFALKNKKWILL----AVSGYGAFRVYHSPSISQKRKRISKLFTLLLN 56
Query: 59 VIEVVADSSEMIGVVSKDLKVFLQSDSDEIPNSLKQISKIAKSNEFSESLIRVSQALTVG 118
+IE +DS+E + V+SKDL FL+SDSD+IPNSLKQISKIAKS+E + SLIR +QA+TVG
Sbjct: 57 LIEAASDSAETVSVISKDLTEFLRSDSDQIPNSLKQISKIAKSDELNSSLIRFTQAMTVG 116
Query: 119 ILKGYKLGSKSDNGSQTSYGFSDRVMDKLFSNAGSGFVSVVVGSFARNL 167
+++G GS S GF+DRVMDKLF+ +GSGF S +VGSFARNL
Sbjct: 117 LIRGIDDGSGS--------GFTDRVMDKLFTKSGSGFASAIVGSFARNL 157
>AT1G59510.1 | Carbohydrate-binding protein | Chr1:21859768-21860913
FORWARD LENGTH=381 | 201606
Length = 381
Score = 167 bits (424), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 113/154 (73%), Gaps = 6/154 (3%)
Query: 14 RRRKKWILLLAAFGVTGYTAYKVYNLPSVVKKRKRLIKLVGALISVIEVVADSSEMIGVV 73
+RR+KW++LLA FGV+GY Y+VYN + KK KRL+KL ++S E+V DS+E I +V
Sbjct: 15 QRRRKWLILLAVFGVSGYGVYRVYNSQYIAKKTKRLMKLFSGIVSFAEMVIDSAETISIV 74
Query: 74 SKDLKVFLQSDSDEIPNSLKQISKIAKSNEFSESLIRVSQALTVGILKGYKLGSKSDNGS 133
S+DLK FL+S+S EIPNSLKQ+SKI KS EF++SL RVS+A+ +G+ +GY + S
Sbjct: 75 SRDLKEFLESNSHEIPNSLKQLSKITKSKEFTDSLARVSEAVAIGVFRGYNSDPNVEKES 134
Query: 134 QTSYGFSDRVMDKLFSNAGSGFVSVVVGSFARNL 167
S V+D++FS G+GFVSVVVGSFA+NL
Sbjct: 135 NLS------VVDRVFSEEGAGFVSVVVGSFAKNL 162