BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4550.1
(824 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G07410.1 | Transducin family protein / WD-40 repeat family pr... 964 0.0
AT1G27470.1 | transducin family protein / WD-40 repeat family pr... 926 0.0
AT4G07410.2 | Transducin family protein / WD-40 repeat family pr... 800 0.0
AT5G25150.1 | TBP-associated factor 5 | Chr5:8677117-8682058 FOR... 52 2e-06
AT5G25150.2 | TBP-associated factor 5 | Chr5:8677117-8681787 FOR... 52 2e-06
>AT4G07410.1 | Transducin family protein / WD-40 repeat family
protein | Chr4:4201465-4205136 REVERSE LENGTH=815 |
201606
Length = 815
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/830 (59%), Positives = 626/830 (75%), Gaps = 30/830 (3%)
Query: 7 HRNSSILWKPSPIVALATSIDESRVAAAREEGSLEIWSVSPGSVDWHCQLTIHGNPNSRV 66
+R SS+ WKPSP+VALA S D+S+VAAARE+GSLEIW VSPG+V WHCQLTIHG+PNSR+
Sbjct: 4 YRCSSVDWKPSPVVALANSSDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRI 63
Query: 67 SSLVWC--PSKTSPFGRLLSSSIDGTVSEWDLFHLKQKIVLDTIGVSIWQMAVEPSDDSL 124
SSL WC PS P GRL SSSIDG++SEWDLF LKQKIVL++IG+SIWQMA+ P
Sbjct: 64 SSLAWCCSPSIGLPSGRLFSSSIDGSISEWDLFDLKQKIVLESIGISIWQMALAP----- 118
Query: 125 LLGQNNTAHHAVNGYASNNVSYLSDDGTSESDDESVISMEVHGQSMVE-SPLVALGCDDG 183
+ G ++ NGY S + + G+ E +S E H +S E ++A CDDG
Sbjct: 119 ISGFSSDVEGIKNGYLSEKSNDEEEIGSEEDGSDS---DEFHEKSEEEIDRILAAACDDG 175
Query: 184 CVRLYSLSGSDGLTYYRSLPRVSARVLSIAWSFDGKLIFSGSSDGFIRCWNVKSAHETYR 243
CVRLY +S + LTYYRSLPRVS R LS+ WS D K IFSGSSDG IRCW+ S HE YR
Sbjct: 176 CVRLYRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYR 235
Query: 244 ITVGLGGLGNGRDICVWSLLLLRSGTLVSGDSSGSVQFWDSNQGTLLQAHSNHKGDVNAL 303
IT GLGGLG+ +ICVWSLL LR LVSGDS+G+VQFWDS GTLL+AHSNHKGDVN L
Sbjct: 236 ITAGLGGLGSSSEICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTL 295
Query: 304 AAAPNHNRVFSAGSDGQVIHYKLSTVTVDSGKDMSSTDVVKKWVYVGYLRAHTHDIRALT 363
AAAP+HNRVFSAG+DGQVI YKLS T + +D+ + +KW Y+GY++AHTHDIRALT
Sbjct: 296 AAAPSHNRVFSAGADGQVILYKLSGST-NGSQDLKPSS-SQKWDYIGYVKAHTHDIRALT 353
Query: 364 TAIPIRREDTLPDEKIAPNKKRRTKFRQRQKPVEFSYGKWAHTGVPMLISAGDDSRLFAY 423
A+PI RED PD+ I P+K R K R++ KPV+F+Y KWAH GVPMLISAGDD++LFAY
Sbjct: 354 VAVPISREDPFPDD-ILPDKASR-KHRKKGKPVDFTYHKWAHLGVPMLISAGDDAKLFAY 411
Query: 424 SAQEFTKFAPHDICPAPQRVPVQLVLNTAMTKSSLILVQNFNSLDVLSVHVNNGAARNAS 483
S QEFTKF+PHDICPAPQR+P+Q+V N+ K+SL+LVQ ++LD+L +++++ ++ AS
Sbjct: 412 SIQEFTKFSPHDICPAPQRIPMQMVHNSMFNKTSLLLVQGISTLDILRLNISSDSSGRAS 471
Query: 484 TSLLARVNSKGKKKIICSSMSSTGTLFAYSDHAKPSLFEL--NEVAKNSWTVKKKQLPRK 541
T L RV S+ +KIICS++S+TG+ FAYSD PSLFEL NE K W+V +++LP +
Sbjct: 472 TKSLVRVKSRDARKIICSAISNTGSHFAYSDQIGPSLFELKKNEFTKCPWSVSRRRLP-E 530
Query: 542 LPFAHSMVFSNDSLRLIVAGHDRKIHVLDVENAELLHTFTPRRKEDNSKSP-PNEPPITR 600
LPFAHSM+FS+D RLI+AGHDR+I+ +D+ + EL++ FTP R+E ++P P EPPIT+
Sbjct: 531 LPFAHSMIFSSDCSRLIIAGHDRRIYTIDISSLELVYAFTPSREEHEGEAPTPKEPPITK 590
Query: 601 MFTSSDGQWLSAVNSFGDIYVFNLEMKRQHWFISRLDGASVTAGGFHPQNSNVLVIATSS 660
+FTSSDGQWL+A+N FGDIYVFNLE +RQHWFISRLDGASVTA GFHP N+N LVI+TSS
Sbjct: 591 LFTSSDGQWLAAINCFGDIYVFNLETQRQHWFISRLDGASVTAAGFHPWNNNALVISTSS 650
Query: 661 NQVYVFDVDAKQLGKWSMNHPIVLPERFQESPGEIIGL-SFPHSCSTSVIIYSARAMCLI 719
NQV+ FDV+A+QLGKWS+ + VLP+R+QE PGE++GL P S+SVI+YS+RA CLI
Sbjct: 651 NQVFAFDVEARQLGKWSLLNTYVLPKRYQEFPGEVLGLSFSPSPNSSSVIVYSSRAKCLI 710
Query: 720 DFEKPVFQNGDID-DDENLSNGVDFSVQKLQHSHESNEKVNRKRKSSKIVEPNLKGKGSS 778
DF KPV ++ + D + NLS ++ + L + + NRKR ++ E L+GK +
Sbjct: 711 DFGKPVEEDEEYDLPNGNLSKTLEGKLVNL--GLKKGKGTNRKR---RLDEYQLEGKSNE 765
Query: 779 ----DFIAFENPVLFLGHLSENSVLVMDKPWKEVVKTFDASPVHRHIFGT 824
+ + +PVLF+GHLS+NS+LV++KPW +VVK+ D PV RHIFGT
Sbjct: 766 RKNFEILPSNHPVLFVGHLSKNSILVIEKPWMDVVKSLDNQPVDRHIFGT 815
>AT1G27470.1 | transducin family protein / WD-40 repeat family
protein | Chr1:9540368-9544218 REVERSE LENGTH=810 |
201606
Length = 810
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/828 (57%), Positives = 603/828 (72%), Gaps = 31/828 (3%)
Query: 7 HRNSSILWKPSPIVALATSIDESRVAAAREEGSLEIWSVSPGSVDWHCQLTIHGNPNSRV 66
+R SSI WKPSP+VALATS D S+VAAARE+GSLE+W VSPG+ WHCQL IHG+P SR+
Sbjct: 4 YRCSSIDWKPSPVVALATSADGSQVAAAREDGSLELWLVSPGASSWHCQLIIHGDPKSRI 63
Query: 67 SSLVW--CPSKTSPFGRLLSSSIDGTVSEWDLFHLKQKIVLDTIGVSIWQMAVEPSDDSL 124
S L W SK S RL SSSIDG++SEWDLF LKQK+VLD+IG SIWQ+A+ P
Sbjct: 64 SHLAWFGTGSKGSSSARLFSSSIDGSISEWDLFDLKQKVVLDSIGFSIWQIALAPIS--- 120
Query: 125 LLGQNNTAHHAVNGYASNNV-----SYLSDDGTSESDDESVISMEVHGQSMVESPLVALG 179
+ ++ A NGY S S + DD + DE V +++ H +A
Sbjct: 121 IEAESKEAKLIQNGYLSEKSDDEEESGVEDDSELDELDEKVEALDRH---------LAAA 171
Query: 180 CDDGCVRLYSLSGSDGLTYYRSLPRVSARVLSIAWSFDGKLIFSGSSDGFIRCWNVKSAH 239
CDDGCVR+Y +S SD LTYYRSLPRV+ R LS+ WS D + IFSGSSDG IRCW+ H
Sbjct: 172 CDDGCVRIYYISESDKLTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWDANLCH 231
Query: 240 ETYRITVGLGGLGNGRDICVWSLLLLRSGTLVSGDSSGSVQFWDSNQGTLLQAHSNHKGD 299
E YRITVGLGGLGNG ++C+WSLL LR G LVSGDS+GSVQFWDS GTLLQAHSNHKGD
Sbjct: 232 EVYRITVGLGGLGNGSELCIWSLLSLRYGVLVSGDSTGSVQFWDSQHGTLLQAHSNHKGD 291
Query: 300 VNALAAAPNHNRVFSAGSDGQVIHYKLSTVTVDSGKDMSSTDVVKKWVYVGYLRAHTHDI 359
VNALAA+P+HNRVFSAG+DGQVI YKLS T S S+ +KW Y+G +RAHTHDI
Sbjct: 292 VNALAASPSHNRVFSAGADGQVILYKLSGGTSRSQDFKPSS--AQKWDYIGCVRAHTHDI 349
Query: 360 RALTTAIPIRREDTLPDEKIAPNKKRRTKFRQRQKPVEFSYGKWAHTGVPMLISAGDDSR 419
RALT A+PI E ++PD N K + ++R++P FSY KWAH GVPMLISAGDD++
Sbjct: 350 RALTVAVPISWEGSIPDR----NAKVTSPKQRRKEPAGFSYHKWAHLGVPMLISAGDDAK 405
Query: 420 LFAYSAQEFTKFAPHDICPAPQRVPVQLVLNTAMTKSSLILVQNFNSLDVLSVHVNNGAA 479
L+AYS QEFTKF PHDICPAPQRVP+Q+V NT ++SL+LVQ+ SLD+L +H++N ++
Sbjct: 406 LYAYSVQEFTKFPPHDICPAPQRVPMQMVHNTVFNQTSLLLVQDSCSLDILRIHISNDSS 465
Query: 480 RNASTSLLARVNSKGKKKIICSSMSSTGTLFAYSDHAKPSLFEL--NEVAKNSWTVKKKQ 537
ST L RV SK +KIICS++S+TG+LFAYSD +PSLFEL N++ KN W+ +K+
Sbjct: 466 GRVSTKPLVRVKSKDARKIICSAISNTGSLFAYSDQVRPSLFELKKNKIGKNPWSANRKR 525
Query: 538 LPRKLPFAHSMVFSNDSLRLIVAGHDRKIHVLDVENAELLHTFTPRRKEDNSKSPPNEPP 597
LP LPFAHSMVFS D RLI+AGHDR+I+++DV + ELLH+FTPR++ +SPP+EPP
Sbjct: 526 LP-NLPFAHSMVFSCDCSRLIIAGHDRRIYIVDVGSMELLHSFTPRQEGQEGESPPHEPP 584
Query: 598 ITRMFTSSDGQWLSAVNSFGDIYVFNLEMKRQHWFISRLDGASVTAGGFHPQNSNVLVIA 657
IT+++TSS+ WL+A+N FGDIYVFNLE +RQHWFISRLDGASV A GFHP+++NV+VI+
Sbjct: 585 ITKLYTSSNDDWLAAINCFGDIYVFNLETQRQHWFISRLDGASVAAAGFHPRDNNVIVIS 644
Query: 658 TSSNQVYVFDVDAKQLGKWSMNHPIVLPERFQESPGEIIGL-SFPHSCSTSVIIYSARAM 716
TSSNQV+ DV+A++L KWS+ LP+ +Q PGE++GL P CS+SVIIYS+RA
Sbjct: 645 TSSNQVFALDVEARELSKWSLLQTFCLPKSYQNFPGEVVGLSFSPSPCSSSVIIYSSRAK 704
Query: 717 CLIDFEKPVFQNGDIDDDENLSNGVDFSVQKLQHSHESNEKVNRKRKSSKIVEPNLKGKG 776
CLI+F KP Q+ D D NLS ++ + + + + R + K + N + K
Sbjct: 705 CLIEFGKPAEQDEDTDTPCNLSEKLEGKLASISMKLGNGAQKRRLEEYQKESKSNKRKK- 763
Query: 777 SSDFIAFENPVLFLGHLSENSVLVMDKPWKEVVKTFDASPVHRHIFGT 824
+ + ++PVL+L HLS++++LV++KPW EV+K D PVHRHIFGT
Sbjct: 764 -FEMVTSKHPVLYLRHLSKSAILVIEKPWMEVIKNLDTQPVHRHIFGT 810
>AT4G07410.2 | Transducin family protein / WD-40 repeat family
protein | Chr4:4201465-4204576 REVERSE LENGTH=702 |
201606
Length = 702
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/698 (58%), Positives = 523/698 (74%), Gaps = 23/698 (3%)
Query: 137 NGYASNNVSYLSDDGTSESDDESVISMEVHGQSMVE-SPLVALGCDDGCVRLYSLSGSDG 195
NGY S + + G+ E +S E H +S E ++A CDDGCVRLY +S +
Sbjct: 18 NGYLSEKSNDEEEIGSEEDGSDS---DEFHEKSEEEIDRILAAACDDGCVRLYRISNLEK 74
Query: 196 LTYYRSLPRVSARVLSIAWSFDGKLIFSGSSDGFIRCWNVKSAHETYRITVGLGGLGNGR 255
LTYYRSLPRVS R LS+ WS D K IFSGSSDG IRCW+ S HE YRIT GLGGLG+
Sbjct: 75 LTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSS 134
Query: 256 DICVWSLLLLRSGTLVSGDSSGSVQFWDSNQGTLLQAHSNHKGDVNALAAAPNHNRVFSA 315
+ICVWSLL LR LVSGDS+G+VQFWDS GTLL+AHSNHKGDVN LAAAP+HNRVFSA
Sbjct: 135 EICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSA 194
Query: 316 GSDGQVIHYKLSTVTVDSGKDMSSTDVVKKWVYVGYLRAHTHDIRALTTAIPIRREDTLP 375
G+DGQVI YKLS T + +D+ + +KW Y+GY++AHTHDIRALT A+PI RED P
Sbjct: 195 GADGQVILYKLSGST-NGSQDLKPSS-SQKWDYIGYVKAHTHDIRALTVAVPISREDPFP 252
Query: 376 DEKIAPNKKRRTKFRQRQKPVEFSYGKWAHTGVPMLISAGDDSRLFAYSAQEFTKFAPHD 435
D+ I P+K R K R++ KPV+F+Y KWAH GVPMLISAGDD++LFAYS QEFTKF+PHD
Sbjct: 253 DD-ILPDKASR-KHRKKGKPVDFTYHKWAHLGVPMLISAGDDAKLFAYSIQEFTKFSPHD 310
Query: 436 ICPAPQRVPVQLVLNTAMTKSSLILVQNFNSLDVLSVHVNNGAARNASTSLLARVNSKGK 495
ICPAPQR+P+Q+V N+ K+SL+LVQ ++LD+L +++++ ++ AST L RV S+
Sbjct: 311 ICPAPQRIPMQMVHNSMFNKTSLLLVQGISTLDILRLNISSDSSGRASTKSLVRVKSRDA 370
Query: 496 KKIICSSMSSTGTLFAYSDHAKPSLFEL--NEVAKNSWTVKKKQLPRKLPFAHSMVFSND 553
+KIICS++S+TG+ FAYSD PSLFEL NE K W+V +++LP +LPFAHSM+FS+D
Sbjct: 371 RKIICSAISNTGSHFAYSDQIGPSLFELKKNEFTKCPWSVSRRRLP-ELPFAHSMIFSSD 429
Query: 554 SLRLIVAGHDRKIHVLDVENAELLHTFTPRRKEDNSKSP-PNEPPITRMFTSSDGQWLSA 612
RLI+AGHDR+I+ +D+ + EL++ FTP R+E ++P P EPPIT++FTSSDGQWL+A
Sbjct: 430 CSRLIIAGHDRRIYTIDISSLELVYAFTPSREEHEGEAPTPKEPPITKLFTSSDGQWLAA 489
Query: 613 VNSFGDIYVFNLEMKRQHWFISRLDGASVTAGGFHPQNSNVLVIATSSNQVYVFDVDAKQ 672
+N FGDIYVFNLE +RQHWFISRLDGASVTA GFHP N+N LVI+TSSNQV+ FDV+A+Q
Sbjct: 490 INCFGDIYVFNLETQRQHWFISRLDGASVTAAGFHPWNNNALVISTSSNQVFAFDVEARQ 549
Query: 673 LGKWSMNHPIVLPERFQESPGEIIGL-SFPHSCSTSVIIYSARAMCLIDFEKPVFQNGDI 731
LGKWS+ + VLP+R+QE PGE++GL P S+SVI+YS+RA CLIDF KPV ++ +
Sbjct: 550 LGKWSLLNTYVLPKRYQEFPGEVLGLSFSPSPNSSSVIVYSSRAKCLIDFGKPVEEDEEY 609
Query: 732 D-DDENLSNGVDFSVQKLQHSHESNEKVNRKRKSSKIVEPNLKGKGSS----DFIAFENP 786
D + NLS ++ + L + + NRKR ++ E L+GK + + + +P
Sbjct: 610 DLPNGNLSKTLEGKLVNL--GLKKGKGTNRKR---RLDEYQLEGKSNERKNFEILPSNHP 664
Query: 787 VLFLGHLSENSVLVMDKPWKEVVKTFDASPVHRHIFGT 824
VLF+GHLS+NS+LV++KPW +VVK+ D PV RHIFGT
Sbjct: 665 VLFVGHLSKNSILVIEKPWMDVVKSLDNQPVDRHIFGT 702
>AT5G25150.1 | TBP-associated factor 5 | Chr5:8677117-8682058
FORWARD LENGTH=669 | 201606
Length = 669
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 176 VALGCDDGCVRLYSLSGSDGLTYY---RSLPRVSARVLSIAWSFDGKLIFSGSSDGFIRC 232
+A G D VRL+ + + + + RS+ VLS+A S DG+ + SG DG I
Sbjct: 517 IATGSSDKTVRLWDVQTGECVRIFIGHRSM------VLSLAMSPDGRYMASGDEDGTIMM 570
Query: 233 WNVKSAHETYRITVGLGGLGNGRDICVWSLLLLRSGTLV-SGDSSGSVQFWDSNQGTLLQ 291
W++ +A R L G + CVWSL G+L+ SG + +V+ WD T L
Sbjct: 571 WDLSTA----RCITPL----MGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 622
Query: 292 AHSNHKGDVNAL 303
G+ N L
Sbjct: 623 KAEEKNGNSNRL 634
>AT5G25150.2 | TBP-associated factor 5 | Chr5:8677117-8681787
FORWARD LENGTH=665 | 201606
Length = 665
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 176 VALGCDDGCVRLYSLSGSDGLTYY---RSLPRVSARVLSIAWSFDGKLIFSGSSDGFIRC 232
+A G D VRL+ + + + + RS+ VLS+A S DG+ + SG DG I
Sbjct: 517 IATGSSDKTVRLWDVQTGECVRIFIGHRSM------VLSLAMSPDGRYMASGDEDGTIMM 570
Query: 233 WNVKSAHETYRITVGLGGLGNGRDICVWSLLLLRSGTLV-SGDSSGSVQFWDSNQGTLLQ 291
W++ +A R L G + CVWSL G+L+ SG + +V+ WD T L
Sbjct: 571 WDLSTA----RCITPL----MGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 622
Query: 292 AHSNHKGDVNAL 303
G+ N L
Sbjct: 623 KAEEKNGNSNRL 634