BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4570.1
(220 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33800.2 | hypothetical protein | Chr4:16210404-16211307 REVE... 65 3e-13
AT4G33800.1 | hypothetical protein | Chr4:16210404-16211307 REVE... 65 3e-13
AT1G58460.1 | hypothetical protein | Chr1:21721404-21722429 FORW... 45 1e-05
AT1G58460.2 | hypothetical protein | Chr1:21721404-21722250 FORW... 44 3e-05
>AT4G33800.2 | hypothetical protein | Chr4:16210404-16211307 REVERSE
LENGTH=170 | 201606
Length = 170
Score = 65.5 bits (158), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 14/152 (9%)
Query: 10 SNGCESGWTMYLDESCTS-----LNLCNNIDHDHQFNEEFYKQKV-PPIEEEEEDSSMVS 63
S+GCESGWT+YLD+S +S N D + + + + V EEEE+D SM+S
Sbjct: 5 SSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMIS 64
Query: 64 DASSGPSHLHEHYYTETEYSPSITKPMKKNSKKQKIQKHQEHYSSLLDDTASSTVFSFT- 122
DASSGP ++ E E +KK K++K ++ E +SLLDDTASS +F+F
Sbjct: 65 DASSGPRNISE----EDSVKKINIVGLKKQCKREKKRRDYEKMNSLLDDTASSPLFNFPH 120
Query: 123 ---KNNFTLTNKQDSMDNLLNFSQGYSDNQVK 151
K+ +Q ++ L++SQG+S Q +
Sbjct: 121 MLQKSVGGNKIEQTFPESTLDYSQGFSATQFQ 152
>AT4G33800.1 | hypothetical protein | Chr4:16210404-16211307 REVERSE
LENGTH=170 | 201606
Length = 170
Score = 65.5 bits (158), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 14/152 (9%)
Query: 10 SNGCESGWTMYLDESCTS-----LNLCNNIDHDHQFNEEFYKQKV-PPIEEEEEDSSMVS 63
S+GCESGWT+YLD+S +S N D + + + + V EEEE+D SM+S
Sbjct: 5 SSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMIS 64
Query: 64 DASSGPSHLHEHYYTETEYSPSITKPMKKNSKKQKIQKHQEHYSSLLDDTASSTVFSFT- 122
DASSGP ++ E E +KK K++K ++ E +SLLDDTASS +F+F
Sbjct: 65 DASSGPRNISE----EDSVKKINIVGLKKQCKREKKRRDYEKMNSLLDDTASSPLFNFPH 120
Query: 123 ---KNNFTLTNKQDSMDNLLNFSQGYSDNQVK 151
K+ +Q ++ L++SQG+S Q +
Sbjct: 121 MLQKSVGGNKIEQTFPESTLDYSQGFSATQFQ 152
>AT1G58460.1 | hypothetical protein | Chr1:21721404-21722429 FORWARD
LENGTH=177 | 201606
Length = 177
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 81/182 (44%), Gaps = 30/182 (16%)
Query: 10 SNGCESGWTMYLDESCTSLNLCNNIDHDHQFNEEFYKQKVPPIEEEEEDSSMVSDASSGP 69
S+ +SGWTMYL S +S++L H F+ + K +E +EDSSMVSDASSGP
Sbjct: 9 SDAGDSGWTMYLGHS-SSVSL-------HHFDYHNGETK----QEHDEDSSMVSDASSGP 56
Query: 70 SH-----LHE-HYYTETEY--SPSITKPMKKNSKKQKIQKHQEHYSSLLDDTASSTVFSF 121
+ +HE H T+Y K K + Q + E ++S DDTASS
Sbjct: 57 PYYCEETVHEDHLQQNTQYWCKSKSKNKNKNKKKVHEEQGYSERFNSSFDDTASS--LPV 114
Query: 122 TKNNFTLTNKQDSMDNLLNFSQGYSDNQ-----VKSGWSKIML---DLGLGVKSGDNIDN 173
+ Q+ +F Q YS + V SG+ + L L + GDN
Sbjct: 115 GEEVSAHKQHQNQYQRFHDFCQSYSTRRICKEKVNSGFLQQAFPVDKLALDNQGGDNQRK 174
Query: 174 NR 175
R
Sbjct: 175 RR 176
>AT1G58460.2 | hypothetical protein | Chr1:21721404-21722250 FORWARD
LENGTH=181 | 201606
Length = 181
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 10 SNGCESGWTMYLDESCTSLNLCNNIDHDHQFNEEFYKQKVPPIEEEEEDSSMVSDASSGP 69
S+ +SGWTMYL S +S++L H F+ + K +E +EDSSMVSDASSGP
Sbjct: 9 SDAGDSGWTMYLGHS-SSVSL-------HHFDYHNGETK----QEHDEDSSMVSDASSGP 56
Query: 70 SH-----LHE-HYYTETEY--SPSITKPMKKNSKKQKIQKHQEHYSSLLDDTASS 116
+ +HE H T+Y K K + Q + E ++S DDTASS
Sbjct: 57 PYYCEETVHEDHLQQNTQYWCKSKSKNKNKNKKKVHEEQGYSERFNSSFDDTASS 111