BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4610.1
(78 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G67590.1 | NADH-ubiquinone oxidoreductase-like protein | Chr5... 122 2e-37
>AT5G67590.1 | NADH-ubiquinone oxidoreductase-like protein |
Chr5:26958073-26959356 FORWARD LENGTH=154 | 201606
Length = 154
Score = 122 bits (307), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 63/70 (90%)
Query: 5 CRWENPLMGWTSTGDPYANVGEAGLTFDSEEAAKFFAEKHGWDYVVKKRHTPLLKVKAYA 64
+WENPLMGWTSTGDPYANVG++ L FDSEEAAK FAE+HGWDY VKK +TPLLKVK+Y+
Sbjct: 82 LKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYS 141
Query: 65 DNFKWKGPPK 74
DNFKWKG P+
Sbjct: 142 DNFKWKGNPQ 151