BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000066.1_g0010.1
         (72 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G39850.1 | Ribosomal protein S4 | Chr5:15950053-15951171 FORW...   140   6e-44
AT5G15200.1 | Ribosomal protein S4 | Chr5:4935124-4936334 REVERS...   132   1e-40
AT5G15200.2 | Ribosomal protein S4 | Chr5:4935602-4936334 REVERS...   130   1e-40

>AT5G39850.1 | Ribosomal protein S4 | Chr5:15950053-15951171
          FORWARD LENGTH=197 | 201606
          Length = 197

 Score =  140 bits (352), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 68/72 (94%), Positives = 69/72 (95%)

Query: 1  MVHVNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARM 60
          MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRNAAR 
Sbjct: 1  MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61 LLTLDEKNPRRI 72
          LLTLDEKNPRRI
Sbjct: 61 LLTLDEKNPRRI 72


>AT5G15200.1 | Ribosomal protein S4 | Chr5:4935124-4936334 REVERSE
          LENGTH=198 | 201606
          Length = 198

 Score =  132 bits (331), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 64/72 (88%), Positives = 68/72 (94%)

Query: 1  MVHVNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARM 60
          MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRNAAR 
Sbjct: 1  MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61 LLTLDEKNPRRI 72
          LLTLDEK+PRRI
Sbjct: 61 LLTLDEKSPRRI 72


>AT5G15200.2 | Ribosomal protein S4 | Chr5:4935602-4936334 REVERSE
          LENGTH=156 | 201606
          Length = 156

 Score =  130 bits (328), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 64/72 (88%), Positives = 68/72 (94%)

Query: 1  MVHVNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARM 60
          MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRNAAR 
Sbjct: 1  MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61 LLTLDEKNPRRI 72
          LLTLDEK+PRRI
Sbjct: 61 LLTLDEKSPRRI 72

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