BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0070.1
(292 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 216 9e-64
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 216 9e-64
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 162 1e-48
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 66 2e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 216 bits (551), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 156/246 (63%), Gaps = 1/246 (0%)
Query: 1 MNDLGELKYFLGIEVSRSNKGIYLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLFIEPN 60
+ DLG LKYFLG+E++RS GI + QRKY LDLL E G+ C+P P++ +
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369
Query: 61 QIPVDKGRYQRLVGRLMYLAHTRPDLAYALSIVSQFMHNPGEEHMNAVLRILRYLKAAPG 120
VD Y+RL+GRLMYL TR D+++A++ +SQF P H AV++IL Y+K G
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 121 KGILFTKNSGCQTIDVYTDADWAGEVNGRRSTAGYFTFVGGNLVTWRSKKQNVVARSSAE 180
+G+ ++ + Q + V++DA + + RRST GY F+G +L++W+SKKQ VV++SSAE
Sbjct: 430 QGLFYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 181 SEFRGMADGICEALWLRLLLDDLGYPSERPIRLYCDNKAACDIAHNLVQHDRTKHVEVDR 240
+E+R ++ E +WL +L P +P L+CDN AA IA N V H+RTKH+E D
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
Query: 241 CFIKEK 246
++E+
Sbjct: 549 HSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 216 bits (551), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 156/246 (63%), Gaps = 1/246 (0%)
Query: 1 MNDLGELKYFLGIEVSRSNKGIYLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLFIEPN 60
+ DLG LKYFLG+E++RS GI + QRKY LDLL E G+ C+P P++ +
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369
Query: 61 QIPVDKGRYQRLVGRLMYLAHTRPDLAYALSIVSQFMHNPGEEHMNAVLRILRYLKAAPG 120
VD Y+RL+GRLMYL TR D+++A++ +SQF P H AV++IL Y+K G
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 121 KGILFTKNSGCQTIDVYTDADWAGEVNGRRSTAGYFTFVGGNLVTWRSKKQNVVARSSAE 180
+G+ ++ + Q + V++DA + + RRST GY F+G +L++W+SKKQ VV++SSAE
Sbjct: 430 QGLFYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 181 SEFRGMADGICEALWLRLLLDDLGYPSERPIRLYCDNKAACDIAHNLVQHDRTKHVEVDR 240
+E+R ++ E +WL +L P +P L+CDN AA IA N V H+RTKH+E D
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
Query: 241 CFIKEK 246
++E+
Sbjct: 549 HSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 162 bits (409), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 117/195 (60%), Gaps = 2/195 (1%)
Query: 1 MNDLGELKYFLGIEVSRSNKGIYLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLFIEPN 60
M DLG + YFLGI++ G++LSQ KY +L+ GM C+P+ TP+ L +
Sbjct: 33 MKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA 92
Query: 61 QIPVDKGRYQRLVGRLMYLAHTRPDLAYALSIVSQFMHNPGEEHMNAVLRILRYLKAAPG 120
+ P D ++ +VG L YL TRPD++YA++IV Q MH P + + R+LRY+K
Sbjct: 93 KYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIF 151
Query: 121 KGILFTKNSGCQTIDVYTDADWAGEVNGRRSTAGYFTFVGGNLVTWRSKKQNVVARSSAE 180
G+ KNS + + D+DWAG + RRST G+ TF+G N+++W +K+Q V+RSS E
Sbjct: 152 HGLYIHKNSKLN-VQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTE 210
Query: 181 SEFRGMADGICEALW 195
+E+R +A E W
Sbjct: 211 TEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 65.9 bits (159), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 77 MYLAHTRPDLAYALSIVSQFMHNPGEEHMNAVLRILRYLKAAPGKGILFTKNSGCQTIDV 136
MYL TRPDL +A++ +SQF M AV ++L Y+K G+G+ ++ S Q +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQ-LKA 59
Query: 137 YTDADWAGEVNGRRSTAGYFTFV 159
+ D+DWA + RRS G+ + V
Sbjct: 60 FADSDWASCPDTRRSVTGFCSLV 82