BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0080.1
(132 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06740.1 | MuDR family transposase | Chr1:2071194-2073374 FOR... 43 3e-05
>AT1G06740.1 | MuDR family transposase | Chr1:2071194-2073374
FORWARD LENGTH=726 | 201606
Length = 726
Score = 42.7 bits (99), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 6 TFISDRHNGIINGVQNIFPTANHSFCVWHQRNNLNLRLANGARKSKFFQTLIFKAARAIP 65
T +S +++GV+ FP A H FC+ + +S L ++AA +
Sbjct: 418 TILSSGERPVVDGVEANFPAAFHGFCLHYLTERFQREF-----QSSVLVDLFWEAAHCLT 472
Query: 66 ESEYNKTINQMVQKGGSKVAAFFQSLDHASWADSFFPGPRL 106
E+ IN+ +++ + + + Q+ A WA S+F G R
Sbjct: 473 VLEFKSKINK-IEQISPEASLWIQNKSPARWASSYFEGTRF 512