BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0190.1
(1166 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 167 4e-43
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 137 3e-33
AT3G24255.5 | RNA-directed DNA polymerase (reverse transcriptase... 113 1e-25
AT3G24255.4 | RNA-directed DNA polymerase (reverse transcriptase... 113 1e-25
AT3G24255.7 | RNA-directed DNA polymerase (reverse transcriptase... 112 6e-25
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 167 bits (422), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 228/516 (44%), Gaps = 61/516 (11%)
Query: 696 AVPRYQMQFFAIPKGISKSIKAVQRNFWW---GKSKGICTKAWSYICTPKKLGGLGLHLP 752
A+P Y M F +PK + K I +V +FWW ++KG+ KAW ++ K GG+G
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61
Query: 753 DLDNTVLLSKMAWRLKTEPEAIWVKLLKAKYFPHSNTP--GPTKSHHSWNWKTIRKHYSL 810
+ N LL K WR+ + PE++ K+ K++YF H + P P S S+ WK+I +
Sbjct: 62 EAFNLALLGKQMWRMLSRPESLMAKVFKSRYF-HKSDPLNAPLGSRPSFVWKSIHASQEI 120
Query: 811 LDDLSTWEVQSGNDINIWTDNWIPEINGTIQNNNQ----------SDLTKVAQLI--SNN 858
L + V +G DI IW W+ + Q S + KV+ LI S
Sbjct: 121 LRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGR 180
Query: 859 NWNNEVLRANFDVNTQNLIKTI-PVNSEGKDQLKWKLTKSGKFTVASMYQHLSN-NNSNH 916
W +V+ F + LI + P D W T SG +TV S Y L+ N
Sbjct: 181 EWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRS 240
Query: 917 NPN-------NHNWNFIWSLPTVPRIKMFIWKICTKALPVRERIG-KYIDNNTTCPNCTS 968
+P N + IW T P+I+ F+WK + +LPV + +++ + C C S
Sbjct: 241 SPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPS 300
Query: 969 I-ESIEHALLHCALAKNIWFNYNI-----------IYENIMSIADWIFSWENNIHLCYTR 1016
E++ H L C A+ W +I IY N+ W+F+ N + + +
Sbjct: 301 CKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLY----WVFNLGNG-NPQWEK 355
Query: 1017 ENIHYSTILWILWKVRCDHCFQ-YEINDPNKIIRMIENFPKINMKQE--------KIKHT 1067
+ +LW LWK R + F+ E N + R ++ + ++ E ++ +
Sbjct: 356 ASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRS 415
Query: 1068 SSEKWHPPPQNFIKVNVDASFTNITSNVGISLIVHNAESKFIEAKVKSTRARNSEEGEAM 1127
S +W PPP ++K N DA++ GI ++ N + E K RA +
Sbjct: 416 SCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKG---EVKWMGARALPKLKSVLE 472
Query: 1128 SILLGLEWAKAN----QLKNIIVESDNINLIKHLHN 1159
+ L + WA + Q +I ESD+ LI+ L+N
Sbjct: 473 AELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNN 508
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 170/363 (46%), Gaps = 18/363 (4%)
Query: 70 LLDLGYQGNPYTWSNKQLGENLIQERLDRALANLQWLHQFQS-YGVTHLEAVGSDHLPIL 128
L+D+ +G YTWSN Q +N I +LDRA+AN W F S V L V SDH P +
Sbjct: 261 LVDIPSRGVHYTWSNHQ-DDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCI 318
Query: 129 LDNKDPSQTIPKPFKFIRTWMTHPDCYNFIADNWE-HIKQYQNPNNIQQDLKKLSKQLSK 187
+ ++ + K F++ THP + WE I + ++ + LK K
Sbjct: 319 IILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKL 378
Query: 188 WNKQVFGNIENNINQITKSLQNSKSK------EEYHKLTLALEELYN----QQESLWKEK 237
N+Q FGNI++ + SL++ +S+ + ++ + +N ES +++K
Sbjct: 379 LNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQK 438
Query: 238 SRNNFITLGDKNTKYFHSQAIQRNRTNKISAIKDKEGDWHEDIKDIQD---TFTSHLLDI 294
SR ++ GD NT++FH + N I ++ + E++ +++ + +HLL
Sbjct: 439 SRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGS 498
Query: 295 STTI-NPGEDQNTLNLFTPTITQNQNRDLLAIPDKEEINWAIHSLKKEAAPGPDGYPPFF 353
+ I P Q ++ L A+P +EI A+ ++ + APGPD + F
Sbjct: 499 DSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEF 558
Query: 354 FQSNWETVNANIYDLVQNFFKKAYLPPDINHTHICLIPKTPIPQTLADYRPISLLNTTYK 413
F +W V + V+ FF+ +L N T I LIPK L+ +RP+S YK
Sbjct: 559 FWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYK 618
Query: 414 IIT 416
IIT
Sbjct: 619 IIT 621
>AT3G24255.5 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 181/431 (41%), Gaps = 23/431 (5%)
Query: 573 ISHLLFTDNCIIFGKNTIDNIHILKKILQDFCDSSGQMINYAKSNIFYSKNSHPKFKRLI 632
I+HL F D+ ++F +I + +I F D SG I+ KS I Y K I
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTI-YMAGVKDNDKADI 66
Query: 633 MRTLKVKYASASEKYLGAQLFIGAQKTKVFKDILEHIKNKLNKWNHSFLSQAGCTVVISA 692
+ + + +YLG L T + ++E I+ ++ KW LS AG +IS+
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 693 IAAAVPRYQMQFFAIPKGISKSIKAVQRNFWWGKSKGICTK---AWSYICTPKKLGGLGL 749
+ ++ + M F +P K I ++ +F W + K AWS +CTPK GGLG+
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 750 HLPDLDNTVLLSKMAWRLKTEPEAIWVKLLKAKYFPHSN--TPGPTKSHHSWNWKTIRKH 807
N V L K+ WR+ + ++WV+ L+ + + + SW WK I KH
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST-SLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKH 245
Query: 808 YSLLDDLSTWEVQSGNDINIWTDNW--IPEINGTIQNNNQSDL-----TKVAQLISNNNW 860
+L ++ +G++ + W DNW I + + D+ VA+ + N+
Sbjct: 246 RALASGFVKHDIHNGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEAVVNHRP 305
Query: 861 NNEVLRANFDVNTQNLIKTIPVN--SEGKDQLKWKLTKSGKFTVASMYQHLSNNNSNHNP 918
R + + +++I + + G+D ++WK +G + +
Sbjct: 306 RRH--RHDTLLRIEDVIAEVRHQGLTSGEDTVRWK--GNGDIFKPCFNTKETWAATREPK 361
Query: 919 NNHNW-NFIWSLPTVPRIKMFIWKICTKALPVRERIGKY-IDNNTTCPNCTS-IESIEHA 975
NW +W P+ + W L +R+ + +++C C +E+ +H
Sbjct: 362 LKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHL 421
Query: 976 LLHCALAKNIW 986
C + +W
Sbjct: 422 FFTCPYSAEVW 432
>AT3G24255.4 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 181/431 (41%), Gaps = 23/431 (5%)
Query: 573 ISHLLFTDNCIIFGKNTIDNIHILKKILQDFCDSSGQMINYAKSNIFYSKNSHPKFKRLI 632
I+HL F D+ ++F +I + +I F D SG I+ KS I Y K I
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTI-YMAGVKDNDKADI 66
Query: 633 MRTLKVKYASASEKYLGAQLFIGAQKTKVFKDILEHIKNKLNKWNHSFLSQAGCTVVISA 692
+ + + +YLG L T + ++E I+ ++ KW LS AG +IS+
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 693 IAAAVPRYQMQFFAIPKGISKSIKAVQRNFWWGKSKGICTK---AWSYICTPKKLGGLGL 749
+ ++ + M F +P K I ++ +F W + K AWS +CTPK GGLG+
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 750 HLPDLDNTVLLSKMAWRLKTEPEAIWVKLLKAKYFPHSN--TPGPTKSHHSWNWKTIRKH 807
N V L K+ WR+ + ++WV+ L+ + + + SW WK I KH
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST-SLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKH 245
Query: 808 YSLLDDLSTWEVQSGNDINIWTDNW--IPEINGTIQNNNQSDL-----TKVAQLISNNNW 860
+L ++ +G++ + W DNW I + + D+ VA+ + N+
Sbjct: 246 RALASGFVKHDIHNGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEAVVNHRP 305
Query: 861 NNEVLRANFDVNTQNLIKTIPVN--SEGKDQLKWKLTKSGKFTVASMYQHLSNNNSNHNP 918
R + + +++I + + G+D ++WK +G + +
Sbjct: 306 RRH--RHDTLLRIEDVIAEVRHQGLTSGEDTVRWK--GNGDIFKPCFNTKETWAATREPK 361
Query: 919 NNHNW-NFIWSLPTVPRIKMFIWKICTKALPVRERIGKY-IDNNTTCPNCTS-IESIEHA 975
NW +W P+ + W L +R+ + +++C C +E+ +H
Sbjct: 362 LKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHL 421
Query: 976 LLHCALAKNIW 986
C + +W
Sbjct: 422 FFTCPYSAEVW 432
>AT3G24255.7 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8793208 FORWARD LENGTH=828 | 201606
Length = 828
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 7/265 (2%)
Query: 573 ISHLLFTDNCIIFGKNTIDNIHILKKILQDFCDSSGQMINYAKSNIFYSKNSHPKFKRLI 632
I+HL F D+ ++F +I + +I F D SG I+ KS I Y K I
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTI-YMAGVKDNDKADI 66
Query: 633 MRTLKVKYASASEKYLGAQLFIGAQKTKVFKDILEHIKNKLNKWNHSFLSQAGCTVVISA 692
+ + + +YLG L T + ++E I+ ++ KW LS AG +IS+
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 693 IAAAVPRYQMQFFAIPKGISKSIKAVQRNFWWGKSKGICTK---AWSYICTPKKLGGLGL 749
+ ++ + M F +P K I ++ +F W + K AWS +CTPK GGLG+
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 750 HLPDLDNTVLLSKMAWRLKTEPEAIWVKLLKAKYFPHSN--TPGPTKSHHSWNWKTIRKH 807
N V L K+ WR+ + ++WV+ L+ + + + SW WK I KH
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST-SLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKH 245
Query: 808 YSLLDDLSTWEVQSGNDINIWTDNW 832
+L ++ +G++ + W DNW
Sbjct: 246 RALASGFVKHDIHNGSNTSFWFDNW 270