BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0220.1
(86 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 89 7e-24
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 82 1e-19
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 82 1e-19
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 89.0 bits (219), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 51/59 (86%)
Query: 2 NILGCKWVFKTKLKVDGTMERHKARLVAKGFHQLDGLDYSETFNPVVKSSTIRVVLTMA 60
NILGCKWVFKTKL DGT++R KARLVAKGFHQ +G+ + ET++PVV+++TIR +L +A
Sbjct: 67 NILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 81.6 bits (200), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 53/73 (72%)
Query: 4 LGCKWVFKTKLKVDGTMERHKARLVAKGFHQLDGLDYSETFNPVVKSSTIRVVLTMAVAN 63
+GCKWV+K K DGT+ER+KARLVAKG+ Q +G+D+ ETF+PV K ++++++L ++
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 64 GWHIKQLDYPMLF 76
+ + QLD F
Sbjct: 187 NFTLHQLDISNAF 199
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 81.6 bits (200), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 53/73 (72%)
Query: 4 LGCKWVFKTKLKVDGTMERHKARLVAKGFHQLDGLDYSETFNPVVKSSTIRVVLTMAVAN 63
+GCKWV+K K DGT+ER+KARLVAKG+ Q +G+D+ ETF+PV K ++++++L ++
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 64 GWHIKQLDYPMLF 76
+ + QLD F
Sbjct: 187 NFTLHQLDISNAF 199