BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0260.1
(436 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 105 5e-24
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 105 5e-24
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 97 9e-23
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 56 1e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 105 bits (263), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 122/276 (44%), Gaps = 20/276 (7%)
Query: 164 KQVGRIRYNRLSEYLIKEGYVNDLICPCLFIKKGDVGFVILAVYVDDINFIGT-PKELSK 222
KQ R + + S LI G+V F+K F+ + VYVDDI + +
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDE 299
Query: 223 AAEYLKKEFEMKDLGKTKICLCLQIERSTSGILVHQTLYTEKVLKHFNMENSYPLSTLMV 282
LK F+++DLG K L L+I RS +GI + Q Y +L + P S
Sbjct: 300 LKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSV--- 356
Query: 283 VRSFDALKDPFRPKEKDETLLGPEV----PYLTVIGALSYLAQCTRPDITFAVNLLARYS 338
P P G + Y +IG L YL Q TR DI+FAVN L+++S
Sbjct: 357 ---------PMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFS 406
Query: 339 AAPTKRHWVGVKQILRYLRGTTDMGLFYSKDLSCNSEVKGYTDAGYISDPHKGISQTTYV 398
AP H V +IL Y++GT GLFYS +V ++DA + S S Y
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTRRSTNGYC 464
Query: 399 FTSGGTAFSWRSSKQSMPATSSNHVEIIVLHAASRE 434
G + SW+S KQ + + SS E L A+ E
Sbjct: 465 MFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 500
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 105 bits (263), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 122/276 (44%), Gaps = 20/276 (7%)
Query: 164 KQVGRIRYNRLSEYLIKEGYVNDLICPCLFIKKGDVGFVILAVYVDDINFIGT-PKELSK 222
KQ R + + S LI G+V F+K F+ + VYVDDI + +
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDE 299
Query: 223 AAEYLKKEFEMKDLGKTKICLCLQIERSTSGILVHQTLYTEKVLKHFNMENSYPLSTLMV 282
LK F+++DLG K L L+I RS +GI + Q Y +L + P S
Sbjct: 300 LKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSV--- 356
Query: 283 VRSFDALKDPFRPKEKDETLLGPEV----PYLTVIGALSYLAQCTRPDITFAVNLLARYS 338
P P G + Y +IG L YL Q TR DI+FAVN L+++S
Sbjct: 357 ---------PMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFS 406
Query: 339 AAPTKRHWVGVKQILRYLRGTTDMGLFYSKDLSCNSEVKGYTDAGYISDPHKGISQTTYV 398
AP H V +IL Y++GT GLFYS +V ++DA + S S Y
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTRRSTNGYC 464
Query: 399 FTSGGTAFSWRSSKQSMPATSSNHVEIIVLHAASRE 434
G + SW+S KQ + + SS E L A+ E
Sbjct: 465 MFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 500
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 97.1 bits (240), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 13/232 (5%)
Query: 204 LAVYVDDINFIGTPKELSKAAEY-LKKEFEMKDLGKTKICLCLQIERSTSGILVHQTLYT 262
L +YVDDI G+ L + L F MKDLG L +QI+ SG+ + QT Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 263 EKVLKHFNMENSYPLSTLMVVRSFDALKDPFRPKEKDETLLGPEVPYLTVIGALSYLAQC 322
E++L + M + P+ST + ++ ++ P D + +++GAL YL
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD---------FRSIVGALQYLT-L 112
Query: 323 TRPDITFAVNLLARYSAAPTKRHWVGVKQILRYLRGTTDMGLFYSKDLSCNSEVKGYTDA 382
TRPDI++AVN++ + PT + +K++LRY++GT GL+ K+ N V+ + D+
Sbjct: 113 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN--VQAFCDS 170
Query: 383 GYISDPHKGISQTTYVFTSGGTAFSWRSSKQSMPATSSNHVEIIVLHAASRE 434
+ S T + G SW + +Q + SS E L + E
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAE 222
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 55.8 bits (133), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 323 TRPDITFAVNLLARYSAAPTKRHWVGVKQILRYLRGTTDMGLFYSKDLSCNSEVKGYTDA 382
TRPD+TFAVN L+++S+A V ++L Y++GT GLFYS + + ++K + D+
Sbjct: 6 TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSA--TSDLQLKAFADS 63
Query: 383 GYISDPHKGISQTTY 397
+ S P S T +
Sbjct: 64 DWASCPDTRRSVTGF 78