BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0370.1
(111 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943 REV... 58 8e-11
AT5G15685.1 | mutator transposase MUDRA protein | Chr5:5111820-5... 56 4e-10
AT1G06740.1 | MuDR family transposase | Chr1:2071194-2073374 FOR... 50 5e-08
>AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943
REVERSE LENGTH=777 | 201606
Length = 777
Score = 57.8 bits (138), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 13 VIYIDGTFAKTRFNGCILAVVIKDGNDGLFPIAYAVVDIGNDDNWDWF 60
++++D K+++ G +LA DG+D +FP+A+AVVD DDNW+WF
Sbjct: 397 LVFLDSMQLKSKYQGTLLAATSVDGDDEVFPLAFAVVDAETDDNWEWF 444
>AT5G15685.1 | mutator transposase MUDRA protein |
Chr5:5111820-5113456 FORWARD LENGTH=493 | 201606
Length = 493
Score = 55.8 bits (133), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VIYIDGTFAKTRFNGCILAVVIKDGNDGLFPIAYAVVDIGNDDNWDWFPGNLK 65
+I IDGTF K GC+ + D N+ ++P+A+A V N DNW WF LK
Sbjct: 371 LIGIDGTFLKHAVKGCLFTAIAHDANNQIYPVAWATVQSKNADNWLWFLNQLK 423
>AT1G06740.1 | MuDR family transposase | Chr1:2071194-2073374
FORWARD LENGTH=726 | 201606
Length = 726
Score = 50.1 bits (118), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 13 VIYIDGTFAKTRFNGCILAVVIKDGNDGLFPIAYAVVDIGNDDNWDWFPGNLKLVVD 69
+I +D T K+++ G +L DG+ +FP+A+A+V+ NDDNW F L+ ++D
Sbjct: 355 LIALDSTVLKSKYPGTLLLATGFDGDGAVFPLAFAIVNEENDDNWHRFLSELRKILD 411