BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0560.1
(428 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 6e-45
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 6e-45
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 105 7e-26
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 52 3e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (424), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 184/381 (48%), Gaps = 36/381 (9%)
Query: 1 MNLMDVVIAYLYGKLDTDIYMKVSEGFKLPGGN---PRTMYSLKLNRGLYGLKQAGRMWY 57
++ +D+ A+L G LD +IYMK+ G+ G+ P + LK + +YGLKQA R W+
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWF 247
Query: 58 NHLSEYLIKEGYVNDLVCPCLFIKKGNVRFAILVVYVDDI----NLIGTLEELSKAAKYL 113
S LI G+V F+K F ++VYVDDI N ++EL L
Sbjct: 248 LKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQ---L 304
Query: 114 KKEFKMKDLGKTKFCLGLQIERSTSGILVHQTLYTEKVLKRFNMENSYPLSTPMVVRSLD 173
K FK++DLG K+ LGL+I RS +GI + Q Y +L + P S PM
Sbjct: 305 KSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPM------ 358
Query: 174 FLKDP---FRPKEEDETLFGPEVPYMSAIGVLSYLAQCIRPDIAFAVNLLARYSSTPTKR 230
DP F + F Y IG L YL Q R DI+FAVN L+++S P
Sbjct: 359 ---DPSVTFSAHSGGD--FVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLA 412
Query: 231 HWVGVKQILRYLRGTTDMELFYLKDLSGDSQVKGYTDASYISDPHKGISQTGYVFTSGGT 290
H V +IL Y++GT LFY + Q++ ++DAS+ S S GY G +
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQ--AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 291 TFSWRSSKQSMPATSSNHQEIIALHEATRECVWLRSIIQHIRSSSGLDSITKSPTVIHED 350
SW+S KQ + + SS E AL AT E +WL + ++ PT++ D
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP------LSKPTLLFCD 524
Query: 351 NSACIAQMREGYIKGERTKHI 371
N+A I + + ERTKHI
Sbjct: 525 NTAAI-HIATNAVFHERTKHI 544
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (424), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 184/381 (48%), Gaps = 36/381 (9%)
Query: 1 MNLMDVVIAYLYGKLDTDIYMKVSEGFKLPGGN---PRTMYSLKLNRGLYGLKQAGRMWY 57
++ +D+ A+L G LD +IYMK+ G+ G+ P + LK + +YGLKQA R W+
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWF 247
Query: 58 NHLSEYLIKEGYVNDLVCPCLFIKKGNVRFAILVVYVDDI----NLIGTLEELSKAAKYL 113
S LI G+V F+K F ++VYVDDI N ++EL L
Sbjct: 248 LKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQ---L 304
Query: 114 KKEFKMKDLGKTKFCLGLQIERSTSGILVHQTLYTEKVLKRFNMENSYPLSTPMVVRSLD 173
K FK++DLG K+ LGL+I RS +GI + Q Y +L + P S PM
Sbjct: 305 KSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPM------ 358
Query: 174 FLKDP---FRPKEEDETLFGPEVPYMSAIGVLSYLAQCIRPDIAFAVNLLARYSSTPTKR 230
DP F + F Y IG L YL Q R DI+FAVN L+++S P
Sbjct: 359 ---DPSVTFSAHSGGD--FVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLA 412
Query: 231 HWVGVKQILRYLRGTTDMELFYLKDLSGDSQVKGYTDASYISDPHKGISQTGYVFTSGGT 290
H V +IL Y++GT LFY + Q++ ++DAS+ S S GY G +
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQ--AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 291 TFSWRSSKQSMPATSSNHQEIIALHEATRECVWLRSIIQHIRSSSGLDSITKSPTVIHED 350
SW+S KQ + + SS E AL AT E +WL + ++ PT++ D
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP------LSKPTLLFCD 524
Query: 351 NSACIAQMREGYIKGERTKHI 371
N+A I + + ERTKHI
Sbjct: 525 NTAAI-HIATNAVFHERTKHI 544
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 105 bits (262), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 112/235 (47%), Gaps = 13/235 (5%)
Query: 90 LVVYVDDINLIGTLEELSKAAKY-LKKEFKMKDLGKTKFCLGLQIERSTSGILVHQTLYT 148
L++YVDDI L G+ L + L F MKDLG + LG+QI+ SG+ + QT Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 149 EKVLKRFNMENSYPLSTPMVVRSLDFLKDPFRPKEEDETLFGPEVPYMSAIGVLSYLAQC 208
E++L M + P+STP+ ++ + P D + S +G L YL
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD---------FRSIVGALQYLT-L 112
Query: 209 IRPDIAFAVNLLARYSSTPTKRHWVGVKQILRYLRGTTDMELFYLKDLSGDSQVKGYTDA 268
RPDI++AVN++ + PT + +K++LRY++GT L+ K+ V+ + D+
Sbjct: 113 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKN--SKLNVQAFCDS 170
Query: 269 SYISDPHKGISQTGYVFTSGGTTFSWRSSKQSMPATSSNHQEIIALHEATRECVW 323
+ S TG+ G SW + +Q + SS E AL E W
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 52.4 bits (124), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 210 RPDIAFAVNLLARYSSTPTKRHWVGVKQILRYLRGTTDMELFYLKDLSGDSQVKGYTDAS 269
RPD+ FAVN L+++SS V ++L Y++GT LFY + D Q+K + D+
Sbjct: 7 RPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFY--SATSDLQLKAFADSD 64
Query: 270 YISDPHKGISQTGY 283
+ S P S TG+
Sbjct: 65 WASCPDTRRSVTGF 78