BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0630.1
(941 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 268 3e-75
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 268 3e-75
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 94 5e-21
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 88 9e-20
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 68 2e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 268 bits (684), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 273/536 (50%), Gaps = 73/536 (13%)
Query: 445 DPCTYEEAMRSDESKQWSLAMNEEIESLRKNQAWELAKQPKGQKVVGSKWVFKKKEGIPG 504
+P TY EA E W AM++EI ++ WE+ P +K +G KWV+K K G
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 505 VEDARCKARLVAKGFTQRQGINFNEVFSPVVKNSSIRVILAVVALYDMEQEQLDVKTAFL 564
+ R KARLVAKG+TQ++GI+F E FSPV K +S+++ILA+ A+Y+ QLD+ AFL
Sbjct: 142 TIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200
Query: 565 HGELEEQIYMRQPEWFEILGKE----DQICLLKKSLYGLKQSPRQWYKRFDTFMVKNGYD 620
+G+L+E+IYM+ P + + + +C LKKS+YGLKQ+ RQW+ +F ++ G+
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 260
Query: 621 RSRFDSCVYHRKLPDGSYVYLLLYVDDMPIACKDMSEIHMLKDQLKGEFEMKDLGASRKI 680
+S D Y K+ ++ +L+YVDD+ I + + + LK QLK F+++DLG +
Sbjct: 261 QSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 319
Query: 681 LGMEIRRDRSAEKLFLSQKTYIEKVLERFGMTEAKLVGTPLAAHFKLSWELSPTTHDETK 740
LG+EI RSA + + Q+ Y +L+ G+ K P+ S H
Sbjct: 320 LGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS------AHSGGD 371
Query: 741 YMSRVPYANAIGSIMYVMVCTRPDISHVVCVISRYIGRPGRGHWQAVKWILR-------- 792
++ Y IG +MY+ + TR DIS V +S++ P H QAV IL
Sbjct: 372 FVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQ 430
Query: 793 --------------------------KWSLTGYTFTLYGSAISWRAVLKSVVALSTTEAE 826
+ S GY L S ISW++ + VV+ S+ EAE
Sbjct: 431 GLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAE 490
Query: 827 YMTATEAVKEAIWLSGLVLDIGLK-QEVTEVYYDNQSAIHLTKNQMYHERTKHIDVRYHF 885
Y + A E +WL+ ++ L + T ++ DN +AIH+ N ++HERTKHI+ H
Sbjct: 491 YRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHS 550
Query: 886 IKDVIEEGEITMKKVFTTDNPADMLTKAVTTFKFKHYLDLMGFPD-VSPTRAGATM 940
+++ + V+ +A ++ F+ Y + GF + +SP G M
Sbjct: 551 VRE---------RSVY----------QATLSYSFQAYDEQDGFTEYLSPILRGTIM 587
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 268 bits (684), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 273/536 (50%), Gaps = 73/536 (13%)
Query: 445 DPCTYEEAMRSDESKQWSLAMNEEIESLRKNQAWELAKQPKGQKVVGSKWVFKKKEGIPG 504
+P TY EA E W AM++EI ++ WE+ P +K +G KWV+K K G
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 505 VEDARCKARLVAKGFTQRQGINFNEVFSPVVKNSSIRVILAVVALYDMEQEQLDVKTAFL 564
+ R KARLVAKG+TQ++GI+F E FSPV K +S+++ILA+ A+Y+ QLD+ AFL
Sbjct: 142 TIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200
Query: 565 HGELEEQIYMRQPEWFEILGKE----DQICLLKKSLYGLKQSPRQWYKRFDTFMVKNGYD 620
+G+L+E+IYM+ P + + + +C LKKS+YGLKQ+ RQW+ +F ++ G+
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 260
Query: 621 RSRFDSCVYHRKLPDGSYVYLLLYVDDMPIACKDMSEIHMLKDQLKGEFEMKDLGASRKI 680
+S D Y K+ ++ +L+YVDD+ I + + + LK QLK F+++DLG +
Sbjct: 261 QSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 319
Query: 681 LGMEIRRDRSAEKLFLSQKTYIEKVLERFGMTEAKLVGTPLAAHFKLSWELSPTTHDETK 740
LG+EI RSA + + Q+ Y +L+ G+ K P+ S H
Sbjct: 320 LGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS------AHSGGD 371
Query: 741 YMSRVPYANAIGSIMYVMVCTRPDISHVVCVISRYIGRPGRGHWQAVKWILR-------- 792
++ Y IG +MY+ + TR DIS V +S++ P H QAV IL
Sbjct: 372 FVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQ 430
Query: 793 --------------------------KWSLTGYTFTLYGSAISWRAVLKSVVALSTTEAE 826
+ S GY L S ISW++ + VV+ S+ EAE
Sbjct: 431 GLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAE 490
Query: 827 YMTATEAVKEAIWLSGLVLDIGLK-QEVTEVYYDNQSAIHLTKNQMYHERTKHIDVRYHF 885
Y + A E +WL+ ++ L + T ++ DN +AIH+ N ++HERTKHI+ H
Sbjct: 491 YRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHS 550
Query: 886 IKDVIEEGEITMKKVFTTDNPADMLTKAVTTFKFKHYLDLMGFPD-VSPTRAGATM 940
+++ + V+ +A ++ F+ Y + GF + +SP G M
Sbjct: 551 VRE---------RSVY----------QATLSYSFQAYDEQDGFTEYLSPILRGTIM 587
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 93.6 bits (231), Expect = 5e-21, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 107/238 (44%), Gaps = 44/238 (18%)
Query: 639 VYLLLYVDDMPIACKDMSEIHMLKDQLKGEFEMKDLGASRKILGMEIRRDRSAEKLFLSQ 698
+YLLLYVDD+ + + ++ML QL F MKDLG LG++I+ S LFLSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 699 KTYIEKVLERFGMTEAKLVGTPLAAHFKLSWELSPTTHDETKYMSRVPYANAIGSIMYVM 758
Y E++L GM + K + TPL KL+ +S KY + + +G++ Y+
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVS-----TAKYPDPSDFRSIVGALQYLT 111
Query: 759 VCTRPDISHVVCVISRYIGRPGRGHWQAVKWILR-------------------------- 792
+ TRPDIS+ V ++ + + P + +K +LR
Sbjct: 112 L-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDS 170
Query: 793 KW--------SLTGYTFTLYGSAISWRAVLKSVVALSTTEAEYMTATEAVKEAIWLSG 842
W S TG+ L + ISW A + V+ S+TE EY E W S
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSSA 228
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 88.2 bits (217), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 461 WSLAMNEEIESLRKNQAWELAKQPKGQKVVGSKWVFKKKEGIPGVEDARCKARLVAKGFT 520
W AM EE+++L +N+ W L P Q ++G KWVFK K G D R KARLVAKGF
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD-RLKARLVAKGFH 98
Query: 521 QRQGINFNEVFSPVVKNSSIRVILAVVALYDMEQE 555
Q +GI F E +SPVV+ ++IR IL V ++ Q
Sbjct: 99 QEEGIYFVETYSPVVRTATIRTILNVAQQLEVGQS 133
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 68.2 bits (165), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 40/69 (57%)
Query: 293 EFWLPEVFWAEAVNTAAYLVNISPCTSIECKTPKEVWFDYPGNYENLRIFDCPAYAHVKE 352
E LP+ F A+A NTA +++N P T+I P EVWF Y LR F C AY H E
Sbjct: 15 ECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYLRRFGCVAYIHCDE 74
Query: 353 GKLDLRSKK 361
GKL R+KK
Sbjct: 75 GKLKPRAKK 83