BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0660.1
(326 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 110 1e-26
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 110 1e-26
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 57 5e-09
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 51 4e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 110 bits (276), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
Query: 123 KGYAQKYGSDYDETFSPIVKPVTIRLILSVAITKGWQVKQLDVKNAFLHGYLDTEVYMEQ 182
KGY Q+ G D+ ETFSP+ K +++LIL+++ + + QLD+ NAFL+G LD E+YM+
Sbjct: 153 KGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKL 212
Query: 183 PIDFINKT----YPDHVCRLHKAIYGLKQAPRACLTRFTTYLQELGFNGSKSDTSLFTYQ 238
P + + P+ VC L K+IYGLKQA R +F+ L GF S SD + F
Sbjct: 213 PPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKI 272
Query: 239 SSSSIIILLLYVDDILI 255
+++ + +L+YVDDI+I
Sbjct: 273 TATLFLCVLVYVDDIII 289
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 255 ITGTLGSGLFYSNAFTPSNTSLTAYSDADWAGDPDTRRSMSGSCIYFGNHLICWTSKKQL 314
I GT+G GLFYS + + L +SDA + DTRRS +G C++ G LI W SKKQ
Sbjct: 424 IKGTVGQGLFYS---SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480
Query: 315 TVSRSQGRNQ 324
VS+S +
Sbjct: 481 VVSKSSAEAE 490
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 21/119 (17%)
Query: 2 EVEYMTATEVVKETIWLSGLVLDISLK-QEVTAVYYDNQSAIHLTKNQMYQERTKHIDVR 60
E EY + E +WL+ ++ L + T ++ DN +AIH+ N ++ ERTKHI+
Sbjct: 488 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESD 547
Query: 61 YHFIKDVIEEGKITMKKVFTTENPADMLTKAVTTFKFKHYLDLMGFPD-VSPTRAGATM 118
H +++ + V+ +A ++ F+ Y + GF + +SP G M
Sbjct: 548 CHSVRE---------RSVY----------QATLSYSFQAYDEQDGFTEYLSPILRGTIM 587
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 110 bits (276), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
Query: 123 KGYAQKYGSDYDETFSPIVKPVTIRLILSVAITKGWQVKQLDVKNAFLHGYLDTEVYMEQ 182
KGY Q+ G D+ ETFSP+ K +++LIL+++ + + QLD+ NAFL+G LD E+YM+
Sbjct: 153 KGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKL 212
Query: 183 PIDFINKT----YPDHVCRLHKAIYGLKQAPRACLTRFTTYLQELGFNGSKSDTSLFTYQ 238
P + + P+ VC L K+IYGLKQA R +F+ L GF S SD + F
Sbjct: 213 PPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKI 272
Query: 239 SSSSIIILLLYVDDILI 255
+++ + +L+YVDDI+I
Sbjct: 273 TATLFLCVLVYVDDIII 289
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 255 ITGTLGSGLFYSNAFTPSNTSLTAYSDADWAGDPDTRRSMSGSCIYFGNHLICWTSKKQL 314
I GT+G GLFYS + + L +SDA + DTRRS +G C++ G LI W SKKQ
Sbjct: 424 IKGTVGQGLFYS---SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480
Query: 315 TVSRSQGRNQ 324
VS+S +
Sbjct: 481 VVSKSSAEAE 490
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 21/119 (17%)
Query: 2 EVEYMTATEVVKETIWLSGLVLDISLK-QEVTAVYYDNQSAIHLTKNQMYQERTKHIDVR 60
E EY + E +WL+ ++ L + T ++ DN +AIH+ N ++ ERTKHI+
Sbjct: 488 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESD 547
Query: 61 YHFIKDVIEEGKITMKKVFTTENPADMLTKAVTTFKFKHYLDLMGFPD-VSPTRAGATM 118
H +++ + V+ +A ++ F+ Y + GF + +SP G M
Sbjct: 548 CHSVRE---------RSVY----------QATLSYSFQAYDEQDGFTEYLSPILRGTIM 587
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 255 ITGTLGSGLFYSNAFTPSNTSLTAYSDADWAGDPDTRRSMSGSCIYFGNHLICWTSKKQL 314
+ GT+ GL+ S ++ A+ D+DWAG TRRS +G C + G ++I W++K+Q
Sbjct: 146 VKGTIFHGLYIHKN---SKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQP 202
Query: 315 TVSRS 319
TVSRS
Sbjct: 203 TVSRS 207
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 51.2 bits (121), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 255 ITGTLGSGLFYSNAFTPSNTSLTAYSDADWAGDPDTRRSMSGSC 298
+ GT+G GLFYS S+ L A++D+DWA PDTRRS++G C
Sbjct: 39 VKGTVGQGLFYS---ATSDLQLKAFADSDWASCPDTRRSVTGFC 79