BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0730.1
(105 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20220.1 | SAUR-like auxin-responsive protein family | Chr3:7... 53 4e-10
AT4G31320.1 | SAUR-like auxin-responsive protein family | Chr4:1... 51 6e-09
AT5G18080.1 | SAUR-like auxin-responsive protein family | Chr5:5... 49 6e-09
AT5G18020.1 | SAUR-like auxin-responsive protein family | Chr5:5... 49 9e-09
AT4G34760.1 | SAUR-like auxin-responsive protein family | Chr4:1... 49 2e-08
>AT3G20220.1 | SAUR-like auxin-responsive protein family |
Chr3:7055060-7055416 FORWARD LENGTH=118 | 201606
Length = 118
Score = 53.1 bits (126), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 28 AKDTNYTTTVHKGFLPVYVG-EDCKRYVVPIKYLVYSNFKMLLDEYSDEENPDFDIKVDG 86
A+D N V +G L VYVG E+ +R+V+P KYL Y F+ L+DE +DE F +G
Sbjct: 41 ARDQN---GVPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVADE----FGYDHEG 93
Query: 87 PIVLHCTTLVFDYVL 101
I + C VF+ +L
Sbjct: 94 GIHIPCEESVFEEIL 108
>AT4G31320.1 | SAUR-like auxin-responsive protein family |
Chr4:15193993-15194562 REVERSE LENGTH=189 | 201606
Length = 189
Score = 51.2 bits (121), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 34 TTTVHKGFLPVYVGEDCKRYVVPIKYLVYSNFKMLLDEYSDEENPDFDIKVDGPIVLHCT 93
TT + KG+L V VG++ KRY +P +YL + F +LL E +E F + G + + C
Sbjct: 77 TTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEE----FGFEQAGILRIPCE 132
Query: 94 TLVFDYVLK 102
VF+ +LK
Sbjct: 133 VAVFESILK 141
>AT5G18080.1 | SAUR-like auxin-responsive protein family |
Chr5:5983840-5984112 FORWARD LENGTH=90 | 201606
Length = 90
Score = 49.3 bits (116), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 25 QLLAKDTNYTTTVHKGFLPVYVGEDC-KRYVVPIKYLVYSNFKMLLDEYSDEENPDFDIK 83
++L++ T + KGFL VYVGE KRY+VP+ YL +F+ LL + EE FD
Sbjct: 12 KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSK--SEEEFGFDHP 69
Query: 84 VDGPIVLHCTTLVFDYVLKHLK 105
+ G + + C F V L+
Sbjct: 70 MGG-LTIPCPEDTFINVTSRLQ 90
>AT5G18020.1 | SAUR-like auxin-responsive protein family |
Chr5:5966305-5966580 REVERSE LENGTH=91 | 201606
Length = 91
Score = 48.9 bits (115), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 25 QLLAKDTNYTTTVHKGFLPVYVGEDC-KRYVVPIKYLVYSNFKMLLDEYSDEENPDFDIK 83
++L++ T + KGFL VYVGE KRY+VPI YL +F+ LL + EE FD
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSK--SEEEFGFDHP 69
Query: 84 VDGPIVLHC 92
+ G + + C
Sbjct: 70 MGG-LTIPC 77
>AT4G34760.1 | SAUR-like auxin-responsive protein family |
Chr4:16582471-16582794 REVERSE LENGTH=107 | 201606
Length = 107
Score = 48.5 bits (114), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 37 VHKGFLPVYVGEDCKRYVVPIKYLVYSNFKMLLDEYSDEENPDFDIKVDGPIVLHCTTLV 96
V KG PVYVGE+ RY+VPI +L + F+ LL +E D D+ + P C LV
Sbjct: 43 VPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIP----CDELV 98
Query: 97 FDYVLKHLK 105
F + ++
Sbjct: 99 FQTLTSMIR 107