BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0750.1
(102 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20220.1 | SAUR-like auxin-responsive protein family | Chr3:7... 54 2e-10
AT5G18080.1 | SAUR-like auxin-responsive protein family | Chr5:5... 51 2e-09
AT5G20810.1 | SAUR-like auxin-responsive protein family | Chr5:7... 52 2e-09
AT5G20810.2 | SAUR-like auxin-responsive protein family | Chr5:7... 52 3e-09
AT5G18020.1 | SAUR-like auxin-responsive protein family | Chr5:5... 50 3e-09
>AT3G20220.1 | SAUR-like auxin-responsive protein family |
Chr3:7055060-7055416 FORWARD LENGTH=118 | 201606
Length = 118
Score = 53.5 bits (127), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 25 AKDTNNTTTVHKGFLPVYVG-EDCKRYVVPIKYLVYSNFKMLLDEYSDEENPDFDIKVDG 83
A+D N V +G L VYVG E+ +R+V+P KYL Y F+ L+DE +DE F +G
Sbjct: 41 ARDQNG---VPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVADE----FGYDHEG 93
Query: 84 PIVLHCTTQVFDYVL 98
I + C VF+ +L
Sbjct: 94 GIHIPCEESVFEEIL 108
>AT5G18080.1 | SAUR-like auxin-responsive protein family |
Chr5:5983840-5984112 FORWARD LENGTH=90 | 201606
Length = 90
Score = 50.8 bits (120), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 15 QSHFKYDQLLAKDTNNTTTVHKGFLPVYVGEDC-KRYVVPIKYLVYSNFKMLLDEYSDEE 73
+S ++L++ T + KGFL VYVGE KRY+VP+ YL +F+ LL + EE
Sbjct: 5 RSLLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSK--SEE 62
Query: 74 NPDFDIKVDGPIVLHCTTQVFDYVLKHLK 102
FD + G + + C F V L+
Sbjct: 63 EFGFDHPMGG-LTIPCPEDTFINVTSRLQ 90
>AT5G20810.1 | SAUR-like auxin-responsive protein family |
Chr5:7044791-7045555 FORWARD LENGTH=165 | 201606
Length = 165
Score = 52.0 bits (123), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 34 VHKGFLPVYVGEDCKRYVVPIKYLVYSNFKMLLDEYSDEENPDFDIKVDGPIVLHCTTQV 93
V KG L VYVG + +R+++P YL +S FK+LL++ +E F G + + C +
Sbjct: 79 VPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEE----FGFDQSGALTIPCEVET 134
Query: 94 FDYVLKHLK 102
F Y+LK ++
Sbjct: 135 FKYLLKCME 143
>AT5G20810.2 | SAUR-like auxin-responsive protein family |
Chr5:7044791-7045363 FORWARD LENGTH=190 | 201606
Length = 190
Score = 52.0 bits (123), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 34 VHKGFLPVYVGEDCKRYVVPIKYLVYSNFKMLLDEYSDEENPDFDIKVDGPIVLHCTTQV 93
V KG L VYVG + +R+++P YL +S FK+LL++ +E F G + + C +
Sbjct: 79 VPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEE----FGFDQSGALTIPCEVET 134
Query: 94 FDYVLK 99
F Y+LK
Sbjct: 135 FKYLLK 140
>AT5G18020.1 | SAUR-like auxin-responsive protein family |
Chr5:5966305-5966580 REVERSE LENGTH=91 | 201606
Length = 91
Score = 50.1 bits (118), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 15 QSHFKYDQLLAKDTNNTTTVHKGFLPVYVGEDC-KRYVVPIKYLVYSNFKMLLDEYSDEE 73
+S ++L++ T + KGFL VYVGE KRY+VPI YL +F+ LL + EE
Sbjct: 5 RSLLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSK--SEE 62
Query: 74 NPDFDIKVDGPIVLHCTTQVF 94
FD + G + + C F
Sbjct: 63 EFGFDHPMGG-LTIPCPEDTF 82