BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0790.1
(1067 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 284 3e-80
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 284 3e-80
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 117 4e-30
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 112 2e-27
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 56 7e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 284 bits (726), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 138/328 (42%), Positives = 208/328 (63%), Gaps = 6/328 (1%)
Query: 744 TYMSVLQLPTEPATYKEAAKHIKWCKAMNDEFSALQQNKTWSLVHFHSKMNVLGCKWVYK 803
+++ + EP+TY EA + + WC AM+DE A++ TW + +GCKWVYK
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 804 LKQKSDGTIERYKARLVAKGFHQQEGVDFAETFGPVVKASTIRLILPITITKSWYIKQLD 863
+K SDGTIERYKARLVAKG+ QQEG+DF ETF PV K ++++LIL I+ ++ + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 864 VSNAFLHGVLEDDVYMIQPPEFIEKDKE----DYVCHLHKALYGLKQAPRASFNRFATFL 919
+SNAFL+G L++++YM PP + + + + VC+L K++YGLKQA R F +F+ L
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 920 YQYGFQKSKTDQSMFVFHTNNDIIVLLLYVDDIILTASSASMITKLINDLSVAFKMKDLG 979
+GF +S +D + F+ T + +L+YVDDII+ +++ + + +L + L FK++DLG
Sbjct: 255 IGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLG 314
Query: 980 SLSYFLGIEVSYDSTTSSMLLTHKKYTLQLLQKASLLDSKPSKLPISSGQRISILDGVEL 1039
L YFLG+E++ + + + + +KY L LL + LL KPS +P+ S G +
Sbjct: 315 PLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372
Query: 1040 SSPTEYRSLVGALQYLTLTRPDISFAVN 1067
YR L+G L YL +TR DISFAVN
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVN 400
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 284 bits (726), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 138/328 (42%), Positives = 208/328 (63%), Gaps = 6/328 (1%)
Query: 744 TYMSVLQLPTEPATYKEAAKHIKWCKAMNDEFSALQQNKTWSLVHFHSKMNVLGCKWVYK 803
+++ + EP+TY EA + + WC AM+DE A++ TW + +GCKWVYK
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 804 LKQKSDGTIERYKARLVAKGFHQQEGVDFAETFGPVVKASTIRLILPITITKSWYIKQLD 863
+K SDGTIERYKARLVAKG+ QQEG+DF ETF PV K ++++LIL I+ ++ + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 864 VSNAFLHGVLEDDVYMIQPPEFIEKDKE----DYVCHLHKALYGLKQAPRASFNRFATFL 919
+SNAFL+G L++++YM PP + + + + VC+L K++YGLKQA R F +F+ L
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 920 YQYGFQKSKTDQSMFVFHTNNDIIVLLLYVDDIILTASSASMITKLINDLSVAFKMKDLG 979
+GF +S +D + F+ T + +L+YVDDII+ +++ + + +L + L FK++DLG
Sbjct: 255 IGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLG 314
Query: 980 SLSYFLGIEVSYDSTTSSMLLTHKKYTLQLLQKASLLDSKPSKLPISSGQRISILDGVEL 1039
L YFLG+E++ + + + + +KY L LL + LL KPS +P+ S G +
Sbjct: 315 PLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372
Query: 1040 SSPTEYRSLVGALQYLTLTRPDISFAVN 1067
YR L+G L YL +TR DISFAVN
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVN 400
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 117 bits (294), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 69/98 (70%)
Query: 754 EPATYKEAAKHIKWCKAMNDEFSALQQNKTWSLVHFHSKMNVLGCKWVYKLKQKSDGTIE 813
EP + A K WC+AM +E AL +NKTW LV N+LGCKWV+K K SDGT++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 814 RYKARLVAKGFHQQEGVDFAETFGPVVKASTIRLILPI 851
R KARLVAKGFHQ+EG+ F ET+ PVV+ +TIR IL +
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 112 bits (280), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Query: 943 IVLLLYVDDIILTASSASMITKLINDLSVAFKMKDLGSLSYFLGIEVSYDSTTSSMLLTH 1002
+ LLLYVDDI+LT SS +++ LI LS F MKDLG + YFLGI++ + S + L+
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQ 58
Query: 1003 KKYTLQLLQKASLLDSKPSKLPISSGQRISILDGVELSSPTEYRSLVGALQYLTLTRPDI 1062
KY Q+L A +LD KP P+ S+ + P+++RS+VGALQYLTLTRPDI
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSV-STAKYPDPSDFRSIVGALQYLTLTRPDI 117
Query: 1063 SFAVN 1067
S+AVN
Sbjct: 118 SYAVN 122
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 419 QIYKGIEAVMVGSGK---FLPIESREKSESALLTQTALSYDIWHARLGHSYYGILEQLSK 475
++ KG ++ G+ ++ S E ES L +WH+RL H +E L K
Sbjct: 30 KVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDETRLWHSRLAHMSQRGMELLVK 89
Query: 476 ENKILLCATSDTNFCKSCELGKSKCLPFSTSNSTTNIPLHLVHCDIWGPAPV 527
+ + S FC+ C GK+ + FST TT PL VH D+WG V
Sbjct: 90 KGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSV 141