BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0800.1
(196 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 155 8e-44
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 155 8e-44
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 110 6e-30
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 58 5e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 155 bits (393), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 109/172 (63%), Gaps = 3/172 (1%)
Query: 4 PIDKHLVIVKKILRYLKGSMGSGIRLSPGDLTTLSAYSDSDWAGCPDSRKSTGGFCVFLG 63
P H V KIL Y+KG++G G+ S L +SD+ + C D+R+ST G+C+FLG
Sbjct: 409 PRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLG 468
Query: 64 SSLISWSSKKQATVEKSSTEVEYKSLSTTATELVWISYLMIELRCPLSKPFLLHCDNISA 123
+SLISW SKKQ V KSS E EY++LS E++W++ EL+ PLSKP LL CDN +A
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAA 528
Query: 124 KHLASNPIFHARTKHIEVDFHYVRDL-VSDGTILVQYISTKDQLDDIFTKGL 174
H+A+N +FH RTKHIE D H VR+ V T+ + + +Q D FT+ L
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYL 578
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 155 bits (393), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 109/172 (63%), Gaps = 3/172 (1%)
Query: 4 PIDKHLVIVKKILRYLKGSMGSGIRLSPGDLTTLSAYSDSDWAGCPDSRKSTGGFCVFLG 63
P H V KIL Y+KG++G G+ S L +SD+ + C D+R+ST G+C+FLG
Sbjct: 409 PRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLG 468
Query: 64 SSLISWSSKKQATVEKSSTEVEYKSLSTTATELVWISYLMIELRCPLSKPFLLHCDNISA 123
+SLISW SKKQ V KSS E EY++LS E++W++ EL+ PLSKP LL CDN +A
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAA 528
Query: 124 KHLASNPIFHARTKHIEVDFHYVRDL-VSDGTILVQYISTKDQLDDIFTKGL 174
H+A+N +FH RTKHIE D H VR+ V T+ + + +Q D FT+ L
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYL 578
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 110 bits (276), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 70/100 (70%)
Query: 1 MHKPIDKHLVIVKKILRYLKGSMGSGIRLSPGDLTTLSAYSDSDWAGCPDSRKSTGGFCV 60
MH+P ++K++LRY+KG++ G+ + + A+ DSDWAGC +R+ST GFC
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187
Query: 61 FLGSSLISWSSKKQATVEKSSTEVEYKSLSTTATELVWIS 100
FLG ++ISWS+K+Q TV +SSTE EY++L+ TA EL W S
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 57.8 bits (138), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 8 HLVIVKKILRYLKGSMGSGIRLSPGDLTTLSAYSDSDWAGCPDSRKSTGGFC 59
+ V K+L Y+KG++G G+ S L A++DSDWA CPD+R+S GFC
Sbjct: 28 QMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFC 79