BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0810.1
(112 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 81 5e-19
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 81 5e-19
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 77 3e-18
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 71 4e-17
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 81.3 bits (199), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 35 FSDPTVYRRLIGRLLYLTMTRPDISYAINNLSQFLQKPSTTHPEAPYRVLRYLKGSISND 94
F D YRRLIGRL+YL +TR DIS+A+N LSQF + P H +A ++L Y+KG++
Sbjct: 372 FVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 95 LFLSSTSSLQITGYCDS 111
LF SS + +Q+ + D+
Sbjct: 432 LFYSSQAEMQLQVFSDA 448
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 81.3 bits (199), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 35 FSDPTVYRRLIGRLLYLTMTRPDISYAINNLSQFLQKPSTTHPEAPYRVLRYLKGSISND 94
F D YRRLIGRL+YL +TR DIS+A+N LSQF + P H +A ++L Y+KG++
Sbjct: 372 FVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 95 LFLSSTSSLQITGYCDS 111
LF SS + +Q+ + D+
Sbjct: 432 LFYSSQAEMQLQVFSDA 448
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 77.0 bits (188), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 53/78 (67%)
Query: 35 FSDPTVYRRLIGRLLYLTMTRPDISYAINNLSQFLQKPSTTHPEAPYRVLRYLKGSISND 94
+ DP+ +R ++G L YLT+TRPDISYA+N + Q + +P+ + RVLRY+KG+I +
Sbjct: 94 YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHG 153
Query: 95 LFLSSTSSLQITGYCDSD 112
L++ S L + +CDSD
Sbjct: 154 LYIHKNSKLNVQAFCDSD 171
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 71.2 bits (173), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 49 LYLTMTRPDISYAINNLSQFLQKPSTTHPEAPYRVLRYLKGSISNDLFLSSTSSLQITGY 108
+YLT+TRPD+++A+N LSQF T +A Y+VL Y+KG++ LF S+TS LQ+ +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 109 CDSD 112
DSD
Sbjct: 61 ADSD 64