BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0820.1
(135 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 103 1e-26
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 103 1e-26
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 44 7e-06
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 103 bits (258), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 1 MLGSIPLSWKSKKTPTIAKSSAEAEYRALSQLTSELQWLKYLLQDFDIDHSSPMTVHCVN 60
LG+ +SWKSKK ++KSSAEAEYRALS T E+ WL ++ + S P + C N
Sbjct: 466 FLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDN 525
Query: 61 KAALHIADNPVFHERTKHIEVDCHFARE-NIKTNVIAPRFTPTSDQLSDIFTKSL 114
AA+HIA N VFHERTKHIE DCH RE ++ ++ F +Q D FT+ L
Sbjct: 526 TAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYL 578
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 103 bits (258), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 1 MLGSIPLSWKSKKTPTIAKSSAEAEYRALSQLTSELQWLKYLLQDFDIDHSSPMTVHCVN 60
LG+ +SWKSKK ++KSSAEAEYRALS T E+ WL ++ + S P + C N
Sbjct: 466 FLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDN 525
Query: 61 KAALHIADNPVFHERTKHIEVDCHFARE-NIKTNVIAPRFTPTSDQLSDIFTKSL 114
AA+HIA N VFHERTKHIE DCH RE ++ ++ F +Q D FT+ L
Sbjct: 526 TAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYL 578
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 44.3 bits (103), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 1 MLGSIPLSWKSKKTPTIAKSSAEAEYRALSQLTSELQW 38
LG +SW +K+ PT+++SS E EYRAL+ +EL W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225