BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0830.1
(105 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20220.1 | SAUR-like auxin-responsive protein family | Chr3:7... 52 1e-09
AT5G18080.1 | SAUR-like auxin-responsive protein family | Chr5:5... 50 3e-09
AT5G18020.1 | SAUR-like auxin-responsive protein family | Chr5:5... 50 5e-09
AT5G18050.1 | SAUR-like auxin-responsive protein family | Chr5:5... 50 5e-09
AT2G21220.1 | SAUR-like auxin-responsive protein family | Chr2:9... 49 2e-08
>AT3G20220.1 | SAUR-like auxin-responsive protein family |
Chr3:7055060-7055416 FORWARD LENGTH=118 | 201606
Length = 118
Score = 52.0 bits (123), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 28 AKDTNNTTTVHKGFIPVYVG-EDGKRYVVPIKYLVYSKFKMLLDEYSDEENPDFDIKVDG 86
A+D N V +G + VYVG E+ +R+V+P KYL Y +F+ L+DE +DE F +G
Sbjct: 41 ARDQNG---VPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVADE----FGYDHEG 93
Query: 87 PIVLHCNTQVFDHV 100
I + C VF+ +
Sbjct: 94 GIHIPCEESVFEEI 107
>AT5G18080.1 | SAUR-like auxin-responsive protein family |
Chr5:5983840-5984112 FORWARD LENGTH=90 | 201606
Length = 90
Score = 50.1 bits (118), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 25 QLLAKDTNNTTTVHKGFIPVYVGEDG-KRYVVPIKYLVYSKFKMLLDEYSDEENPDFDIK 83
++L++ T + KGF+ VYVGE KRY+VP+ YL F+ LL + EE FD
Sbjct: 12 KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSK--SEEEFGFDHP 69
Query: 84 VDGPIVLHCNTQVFDHVRKHLK 105
+ G + + C F +V L+
Sbjct: 70 MGG-LTIPCPEDTFINVTSRLQ 90
>AT5G18020.1 | SAUR-like auxin-responsive protein family |
Chr5:5966305-5966580 REVERSE LENGTH=91 | 201606
Length = 91
Score = 49.7 bits (117), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 25 QLLAKDTNNTTTVHKGFIPVYVGEDG-KRYVVPIKYLVYSKFKMLLDEYSDEENPDFDIK 83
++L++ T + KGF+ VYVGE KRY+VPI YL F+ LL + EE FD
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSK--SEEEFGFDHP 69
Query: 84 VDGPIVLHCNTQVFDHVRKHLK 105
+ G + + C F +V +
Sbjct: 70 MGG-LTIPCPEDTFINVTSRFQ 90
>AT5G18050.1 | SAUR-like auxin-responsive protein family |
Chr5:5974691-5974963 REVERSE LENGTH=90 | 201606
Length = 90
Score = 49.7 bits (117), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 25 QLLAKDTNNTTTVHKGFIPVYVGEDGK-RYVVPIKYLVYSKFKMLLDEYSDEENPDFDIK 83
++L++ T + KGF+ VYVGE K RY+VP+ YL F+ LL + DE FD
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFG--FDHP 69
Query: 84 VDGPIVLHCNTQVFDHVRKHLK 105
+ G + + C+ F +V L+
Sbjct: 70 MGG-LTIPCHEDTFINVTSRLQ 90
>AT2G21220.1 | SAUR-like auxin-responsive protein family |
Chr2:9089380-9089694 FORWARD LENGTH=104 | 201606
Length = 104
Score = 48.5 bits (114), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 37 VHKGFIPVYVGEDGKRYVVPIKYLVYSKFKMLLDEYSDEENPDFDIKVDGPIVLHCNTQV 96
V KG PVYVGE RY+VPI +L + KFK LL + +E F D + + C V
Sbjct: 40 VPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEE----FGFNHDMGLTIPCEEVV 95
Query: 97 F 97
F
Sbjct: 96 F 96