BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0840.1
(105 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20220.1 | SAUR-like auxin-responsive protein family | Chr3:7... 58 4e-12
AT1G75580.1 | SAUR-like auxin-responsive protein family | Chr1:2... 55 6e-11
AT2G21220.1 | SAUR-like auxin-responsive protein family | Chr2:9... 54 2e-10
AT5G18080.1 | SAUR-like auxin-responsive protein family | Chr5:5... 53 3e-10
AT5G18020.1 | SAUR-like auxin-responsive protein family | Chr5:5... 52 5e-10
>AT3G20220.1 | SAUR-like auxin-responsive protein family |
Chr3:7055060-7055416 FORWARD LENGTH=118 | 201606
Length = 118
Score = 58.2 bits (139), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 28 AKDTNNTTTVHKGFLPVYVG-EDRKRYVVPIKYLVYSKFKMLLDEYSDEENLDFDIKVDG 86
A+D N V +G L VYVG E+R+R+V+P KYL Y +F+ L+DE +DE F +G
Sbjct: 41 ARDQNG---VPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVADE----FGYDHEG 93
Query: 87 PIVLHCTTQVFDHVL 101
I + C VF+ +L
Sbjct: 94 GIHIPCEESVFEEIL 108
>AT1G75580.1 | SAUR-like auxin-responsive protein family |
Chr1:28377530-28377856 FORWARD LENGTH=108 | 201606
Length = 108
Score = 55.1 bits (131), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 3 MMKMFSSLKTKFGKKQSPSKYDQLSAKDTNNTT-TVHKGFLPVYVGEDRKRYVVPIKYLV 61
M+K + GKKQS + +D N + V KG VYVGE+R RYVVPI +L
Sbjct: 14 MIKQILKRCSSLGKKQS-----NVYGEDENGSPLNVPKGHFVVYVGENRVRYVVPISFLT 68
Query: 62 YSKFKMLLDEYSDEENLDFDIKVDGPIVLHCTTQVFDHVLKHLK 105
+F++LL + +E D D+ + P C VF + L+
Sbjct: 69 RPEFQLLLQQAEEEFGFDHDMGLTIP----CEEVVFRSLTSMLR 108
>AT2G21220.1 | SAUR-like auxin-responsive protein family |
Chr2:9089380-9089694 FORWARD LENGTH=104 | 201606
Length = 104
Score = 53.5 bits (127), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 37 VHKGFLPVYVGEDRKRYVVPIKYLVYSKFKMLLDEYSDEENLDFDIKVDGPIVLHCTTQV 96
V KG PVYVGE R RY+VPI +L + KFK LL + +E + D+ + P C V
Sbjct: 40 VPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIP----CEEVV 95
Query: 97 F 97
F
Sbjct: 96 F 96
>AT5G18080.1 | SAUR-like auxin-responsive protein family |
Chr5:5983840-5984112 FORWARD LENGTH=90 | 201606
Length = 90
Score = 52.8 bits (125), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 28 AKDTNNTTTVHKGFLPVYVGED-RKRYVVPIKYLVYSKFKMLLDEYSDEENLDFDIKVDG 86
++ T + KGFL VYVGE +KRY+VP+ YL F+ LL + EE FD + G
Sbjct: 15 SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSK--SEEEFGFDHPMGG 72
Query: 87 PIVLHCTTQVFDHVLKHLK 105
+ + C F +V L+
Sbjct: 73 -LTIPCPEDTFINVTSRLQ 90
>AT5G18020.1 | SAUR-like auxin-responsive protein family |
Chr5:5966305-5966580 REVERSE LENGTH=91 | 201606
Length = 91
Score = 52.0 bits (123), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 28 AKDTNNTTTVHKGFLPVYVGED-RKRYVVPIKYLVYSKFKMLLDEYSDEENLDFDIKVDG 86
++ T + KGFL VYVGE +KRY+VPI YL F+ LL + EE FD + G
Sbjct: 15 SRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSK--SEEEFGFDHPMGG 72
Query: 87 PIVLHCTTQVFDHVLKHLK 105
+ + C F +V +
Sbjct: 73 -LTIPCPEDTFINVTSRFQ 90