BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0880.1
(105 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20220.1 | SAUR-like auxin-responsive protein family | Chr3:7... 57 2e-11
AT1G75580.1 | SAUR-like auxin-responsive protein family | Chr1:2... 52 1e-09
AT2G21220.1 | SAUR-like auxin-responsive protein family | Chr2:9... 50 3e-09
AT4G31320.1 | SAUR-like auxin-responsive protein family | Chr4:1... 52 5e-09
AT2G24400.1 | SAUR-like auxin-responsive protein family | Chr2:1... 51 6e-09
>AT3G20220.1 | SAUR-like auxin-responsive protein family |
Chr3:7055060-7055416 FORWARD LENGTH=118 | 201606
Length = 118
Score = 56.6 bits (135), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 28 AKDTNNTTTVHKGFLPVYVG-EDRKRYVVPIKYLVYSKFKMLLDEYSDGENLDFDIKVDG 86
A+D N V +G L VYVG E+R+R+V+P KYL Y +F+ L+DE +D +F +G
Sbjct: 41 ARDQNG---VPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVAD----EFGYDHEG 93
Query: 87 PIVLHCTTQVFDHVL 101
I + C VF+ +L
Sbjct: 94 GIHIPCEESVFEEIL 108
>AT1G75580.1 | SAUR-like auxin-responsive protein family |
Chr1:28377530-28377856 FORWARD LENGTH=108 | 201606
Length = 108
Score = 51.6 bits (122), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 2 KMMKMFSSLETKFGKKQSPFKYDQLSAKDTNNTT-TVHKGFLPVYVGEDRKRYVVPIKYL 60
+++K SSL GKKQS + +D N + V KG VYVGE+R RYVVPI +L
Sbjct: 17 QILKRCSSL----GKKQS-----NVYGEDENGSPLNVPKGHFVVYVGENRVRYVVPISFL 67
Query: 61 VYSKFKMLLDEYSDGENLDFDIKVDGPIVLHCTTQVFDHVLKHLK 105
+F++LL + + D D+ + P C VF + L+
Sbjct: 68 TRPEFQLLLQQAEEEFGFDHDMGLTIP----CEEVVFRSLTSMLR 108
>AT2G21220.1 | SAUR-like auxin-responsive protein family |
Chr2:9089380-9089694 FORWARD LENGTH=104 | 201606
Length = 104
Score = 50.4 bits (119), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 37 VHKGFLPVYVGEDRKRYVVPIKYLVYSKFKMLLDEYSDGENLDFDIKVDGPIVLHCTTQV 96
V KG PVYVGE R RY+VPI +L + KFK LL + + +F D + + C V
Sbjct: 40 VPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEE----EFGFNHDMGLTIPCEEVV 95
Query: 97 F 97
F
Sbjct: 96 F 96
>AT4G31320.1 | SAUR-like auxin-responsive protein family |
Chr4:15193993-15194562 REVERSE LENGTH=189 | 201606
Length = 189
Score = 51.6 bits (122), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 33 NTTTVHKGFLPVYVGEDRKRYVVPIKYLVYSKFKMLLDEYSDGENLDFDIKVDGPIVLHC 92
+TT + KG+L V VG++ KRY +P +YL + F +LL E + +F + G + + C
Sbjct: 76 DTTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEE----EFGFEQAGILRIPC 131
Query: 93 TTQVFDHVLK 102
VF+ +LK
Sbjct: 132 EVAVFESILK 141
>AT2G24400.1 | SAUR-like auxin-responsive protein family |
Chr2:10377993-10378529 REVERSE LENGTH=178 | 201606
Length = 178
Score = 51.2 bits (121), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 32 NNTTTVHKGFLPVYVGEDRKRYVVPIKYLVYSKFKMLLDEYSDGENLDFDIKVDGPIVLH 91
+ T V KG+L V VG ++KRY +P +YL + F +LL E + +F + G + +
Sbjct: 59 TDVTAVPKGYLAVSVGLEKKRYTIPTEYLSHQAFYVLLREAEE----EFGFQQAGVLRIP 114
Query: 92 CTTQVFDHVLK 102
C VF+ +LK
Sbjct: 115 CEVSVFESILK 125