BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0890.1
(1028 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 226 1e-60
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 226 1e-60
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 129 3e-33
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 91 1e-20
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 60 2e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 226 bits (576), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 217/454 (47%), Gaps = 107/454 (23%)
Query: 636 AMNEEMKSLQKNDTWELVDCPKDKNPVGCRWIYSVKYKADGTIERYKAILVAKGYTQTYG 695
AM++E+ +++ TWE+ P +K P+GC+W+Y +KY +DGTIERYKA LVAKGYTQ G
Sbjct: 101 AMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEG 160
Query: 696 VDYTETFAPVAKINTVRVLLSLAANLDWPLQQFDVKNAFLHGELLEEVYMDLPPGCKIPQ 755
+D+ ETF+PV K+ +V+++L+++A ++ L Q D+ NAFL+G+L EE+YM LPPG Q
Sbjct: 161 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 220
Query: 756 IH----NQKNYLSKEFEMNDLGPLKYFLGIEVSRSSNGIFLSQRKYTLDLLHEVGMSACE 811
N YL K ++FL V+ G S +T L + C
Sbjct: 221 GDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCV 280
Query: 812 PI-----------DTPVEE---------------------GLKLSVEPNQISVDKGRYQ- 838
+ D V+E GL+++ I++ + +Y
Sbjct: 281 LVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYAL 340
Query: 839 ------RLVG----------RLMYLAHTRSDL-----------------------AYALS 859
L+G + + AH+ D ++A++
Sbjct: 341 DLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVN 400
Query: 860 IVSQFMHNPGEKHMNAVLRILRYLKAAPGKGYF--------------------------- 892
+SQF P H AV++IL Y+K G+G F
Sbjct: 401 KLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRST 460
Query: 893 ----TFIGGNLVTWRSKKQNVVARSSAESEFRGMADGICEALWLRLLLDDLGYPSERPIQ 948
F+G +L++W+SKKQ VV++SSAE+E+R ++ E +WL +L P +P
Sbjct: 461 NGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTL 520
Query: 949 LYCDNKAACDIAHNPVQHDRTKHVEVDRCFIKEK 982
L+CDN AA IA N V H+RTKH+E D ++E+
Sbjct: 521 LFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 226 bits (576), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 217/454 (47%), Gaps = 107/454 (23%)
Query: 636 AMNEEMKSLQKNDTWELVDCPKDKNPVGCRWIYSVKYKADGTIERYKAILVAKGYTQTYG 695
AM++E+ +++ TWE+ P +K P+GC+W+Y +KY +DGTIERYKA LVAKGYTQ G
Sbjct: 101 AMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEG 160
Query: 696 VDYTETFAPVAKINTVRVLLSLAANLDWPLQQFDVKNAFLHGELLEEVYMDLPPGCKIPQ 755
+D+ ETF+PV K+ +V+++L+++A ++ L Q D+ NAFL+G+L EE+YM LPPG Q
Sbjct: 161 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 220
Query: 756 IH----NQKNYLSKEFEMNDLGPLKYFLGIEVSRSSNGIFLSQRKYTLDLLHEVGMSACE 811
N YL K ++FL V+ G S +T L + C
Sbjct: 221 GDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCV 280
Query: 812 PI-----------DTPVEE---------------------GLKLSVEPNQISVDKGRYQ- 838
+ D V+E GL+++ I++ + +Y
Sbjct: 281 LVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYAL 340
Query: 839 ------RLVG----------RLMYLAHTRSDL-----------------------AYALS 859
L+G + + AH+ D ++A++
Sbjct: 341 DLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVN 400
Query: 860 IVSQFMHNPGEKHMNAVLRILRYLKAAPGKGYF--------------------------- 892
+SQF P H AV++IL Y+K G+G F
Sbjct: 401 KLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRST 460
Query: 893 ----TFIGGNLVTWRSKKQNVVARSSAESEFRGMADGICEALWLRLLLDDLGYPSERPIQ 948
F+G +L++W+SKKQ VV++SSAE+E+R ++ E +WL +L P +P
Sbjct: 461 NGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTL 520
Query: 949 LYCDNKAACDIAHNPVQHDRTKHVEVDRCFIKEK 982
L+CDN AA IA N V H+RTKH+E D ++E+
Sbjct: 521 LFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 129 bits (324), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 103/200 (51%), Gaps = 32/200 (16%)
Query: 763 LSKEFEMNDLGPLKYFLGIEVSRSSNGIFLSQRKYTLDLLHEVGMSACEPIDTPVEEGLK 822
LS F M DLGP+ YFLGI++ +G+FLSQ KY +L+ GM C+P+ TP+ L
Sbjct: 27 LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86
Query: 823 LSVEPNQISVDKGRYQRLVGRLMYLAHTRSDLAYALSIVSQFMHNPGEKHMNAVLRILRY 882
SV + D ++ +VG L YL TR D++YA++IV Q MH P + + R+LRY
Sbjct: 87 SSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRY 145
Query: 883 LKAA-------------------------------PGKGYFTFIGGNLVTWRSKKQNVVA 911
+K G+ TF+G N+++W +K+Q V+
Sbjct: 146 VKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVS 205
Query: 912 RSSAESEFRGMADGICEALW 931
RSS E+E+R +A E W
Sbjct: 206 RSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 90.9 bits (224), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 62/88 (70%)
Query: 635 RAMNEEMKSLQKNDTWELVDCPKDKNPVGCRWIYSVKYKADGTIERYKAILVAKGYTQTY 694
+AM EE+ +L +N TW LV P ++N +GC+W++ K +DGT++R KA LVAKG+ Q
Sbjct: 42 QAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEE 101
Query: 695 GVDYTETFAPVAKINTVRVLLSLAANLD 722
G+ + ET++PV + T+R +L++A L+
Sbjct: 102 GIYFVETYSPVVRTATIRTILNVAQQLE 129
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 60.1 bits (144), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 393 NRHLLEVIRAMLIEAHMPLSYWGEALLAATYLINRVPSSTIEFKTP----FQALSDVTTS 448
NR ++E +R+ML E +P ++ +A A ++IN+ PS+ I F P FQ++
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSV------ 55
Query: 449 PTVSNLPPRVFGCVAFVHLHEHQRTKLTPRA 479
PT S L R FGCVA++H E KL PRA
Sbjct: 56 PTYSYL--RRFGCVAYIHCDE---GKLKPRA 81