BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0910.1
(105 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20220.1 | SAUR-like auxin-responsive protein family | Chr3:7... 52 9e-10
AT5G18050.1 | SAUR-like auxin-responsive protein family | Chr5:5... 49 7e-09
AT5G18020.1 | SAUR-like auxin-responsive protein family | Chr5:5... 49 1e-08
AT5G18080.1 | SAUR-like auxin-responsive protein family | Chr5:5... 49 1e-08
AT2G21220.1 | SAUR-like auxin-responsive protein family | Chr2:9... 47 5e-08
>AT3G20220.1 | SAUR-like auxin-responsive protein family |
Chr3:7055060-7055416 FORWARD LENGTH=118 | 201606
Length = 118
Score = 52.4 bits (124), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 28 AKDTINTTTVHKGFLPVYVG-EDCKRYVVPIKYLVYSKFKMLLDEYSDEENPDSDIKVDG 86
++ + V +G L VYVG E+ +R+V+P KYL Y +F+ L+DE +DE D +G
Sbjct: 38 SRPARDQNGVPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVADEFGYDH----EG 93
Query: 87 PIVLHCTTQVFDHVL 101
I + C VF+ +L
Sbjct: 94 GIHIPCEESVFEEIL 108
>AT5G18050.1 | SAUR-like auxin-responsive protein family |
Chr5:5974691-5974963 REVERSE LENGTH=90 | 201606
Length = 90
Score = 49.3 bits (116), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 18 QSHFKYDQLLAKDTINTTTVHKGFLPVYVGEDC-KRYVVPIKYLVYSKFKMLLDEYSDEE 76
+S ++L++ T + KGFL VYVGE KRY+VP+ YL F+ LL + DE
Sbjct: 5 RSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEF 64
Query: 77 NPDSDIKVDGPIVLHCTTQVFDHVLKHLK 105
D + G + + C F +V L+
Sbjct: 65 GFDHPM---GGLTIPCHEDTFINVTSRLQ 90
>AT5G18020.1 | SAUR-like auxin-responsive protein family |
Chr5:5966305-5966580 REVERSE LENGTH=91 | 201606
Length = 91
Score = 48.9 bits (115), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 18 QSHFKYDQLLAKDTINTTTVHKGFLPVYVGEDC-KRYVVPIKYLVYSKFKMLLDEYSDEE 76
+S ++L++ T + KGFL VYVGE KRY+VPI YL F+ LL + +E
Sbjct: 5 RSLLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEF 64
Query: 77 NPDSDIKVDGPIVLHCTTQVFDHVLKHLK 105
D + G + + C F +V +
Sbjct: 65 GFDHPM---GGLTIPCPEDTFINVTSRFQ 90
>AT5G18080.1 | SAUR-like auxin-responsive protein family |
Chr5:5983840-5984112 FORWARD LENGTH=90 | 201606
Length = 90
Score = 48.5 bits (114), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 18 QSHFKYDQLLAKDTINTTTVHKGFLPVYVGEDCK-RYVVPIKYLVYSKFKMLLDEYSDEE 76
+S ++L++ T + KGFL VYVGE K RY+VP+ YL F+ LL + +E
Sbjct: 5 RSLLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEF 64
Query: 77 NPDSDIKVDGPIVLHCTTQVFDHVLKHLK 105
D + G + + C F +V L+
Sbjct: 65 GFDHPM---GGLTIPCPEDTFINVTSRLQ 90
>AT2G21220.1 | SAUR-like auxin-responsive protein family |
Chr2:9089380-9089694 FORWARD LENGTH=104 | 201606
Length = 104
Score = 47.4 bits (111), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 37 VHKGFLPVYVGEDCKRYVVPIKYLVYSKFKMLLDEYSDEENPDSDIKVDGPIVLHCTTQV 96
V KG PVYVGE RY+VPI +L + KFK LL + +E + D+ + P C V
Sbjct: 40 VPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIP----CEEVV 95
Query: 97 F 97
F
Sbjct: 96 F 96