BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0920.1
(246 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 120 6e-31
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 120 6e-31
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 95 2e-23
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 120 bits (302), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 128/244 (52%), Gaps = 11/244 (4%)
Query: 1 MKDLGPAKQILGMHISHDRKAGKLWLSQERYIEKVLERFNMDKTKPVSCPLASDFKLTCN 60
++DLGP K LG+ I+ R A + + Q +Y +L+ + KP S P+
Sbjct: 310 LRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTF--- 364
Query: 61 QCPSTKSEKEEMEKIPHASAIGSLMYAMVCTRPNIAFAVGVVSRFLANPGKEHWLAVKWI 120
S S + ++ + IG LMY + TR +I+FAV +S+F P H AV I
Sbjct: 365 ---SAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 420
Query: 121 LKYLRGTSKARICFVNDKPV-LVGYTDADMVGDVDSKRSTSGYLFTLSGGAVSWQSKLQM 179
L Y++GT + + + + L ++DA D++RST+GY L +SW+SK Q
Sbjct: 421 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480
Query: 180 CVALSTTEAEYIAITECCKEMLRMKRLLEELSMKQDN-YVIHCDSQSAIHLSKNSSFHSK 238
V+ S+ EAEY A++ EM+ + + EL + ++ CD+ +AIH++ N+ FH +
Sbjct: 481 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 540
Query: 239 SRHI 242
++HI
Sbjct: 541 TKHI 544
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 120 bits (302), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 128/244 (52%), Gaps = 11/244 (4%)
Query: 1 MKDLGPAKQILGMHISHDRKAGKLWLSQERYIEKVLERFNMDKTKPVSCPLASDFKLTCN 60
++DLGP K LG+ I+ R A + + Q +Y +L+ + KP S P+
Sbjct: 310 LRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTF--- 364
Query: 61 QCPSTKSEKEEMEKIPHASAIGSLMYAMVCTRPNIAFAVGVVSRFLANPGKEHWLAVKWI 120
S S + ++ + IG LMY + TR +I+FAV +S+F P H AV I
Sbjct: 365 ---SAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 420
Query: 121 LKYLRGTSKARICFVNDKPV-LVGYTDADMVGDVDSKRSTSGYLFTLSGGAVSWQSKLQM 179
L Y++GT + + + + L ++DA D++RST+GY L +SW+SK Q
Sbjct: 421 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480
Query: 180 CVALSTTEAEYIAITECCKEMLRMKRLLEELSMKQDN-YVIHCDSQSAIHLSKNSSFHSK 238
V+ S+ EAEY A++ EM+ + + EL + ++ CD+ +AIH++ N+ FH +
Sbjct: 481 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 540
Query: 239 SRHI 242
++HI
Sbjct: 541 TKHI 544
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 95.1 bits (235), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 1 MKDLGPAKQILGMHISHDRKAGKLWLSQERYIEKVLERFNMDKTKPVSCPLASDFKLTCN 60
MKDLGP LG+ I L+LSQ +Y E++L M KP+S PL L N
Sbjct: 33 MKDLGPVHYFLGIQI--KTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPL----PLKLN 86
Query: 61 QCPSTKSEKEEMEKIPHASAIGSLMYAMVCTRPNIAFAVGVVSRFLANPGKEHWLAVKWI 120
ST + + S +G+L Y + TRP+I++AV +V + + P + +K +
Sbjct: 87 SSVSTAKYPDPSD---FRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRV 142
Query: 121 LKYLRGT-SKARICFVNDKPVLVGYTDADMVGDVDSKRSTSGYLFTLSGGAVSWQSKLQM 179
L+Y++GT N K + + D+D G ++RST+G+ L +SW +K Q
Sbjct: 143 LRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQP 202
Query: 180 CVALSTTEAEYIAITECCKEM 200
V+ S+TE EY A+ E+
Sbjct: 203 TVSRSSTETEYRALALTAAEL 223