BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0950.1
(89 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20220.1 | SAUR-like auxin-responsive protein family | Chr3:7... 56 1e-11
AT2G21210.1 | SAUR-like auxin-responsive protein family | Chr2:9... 54 1e-10
AT4G34760.1 | SAUR-like auxin-responsive protein family | Chr4:1... 53 2e-10
AT4G31320.1 | SAUR-like auxin-responsive protein family | Chr4:1... 54 3e-10
AT1G75580.1 | SAUR-like auxin-responsive protein family | Chr1:2... 53 3e-10
>AT3G20220.1 | SAUR-like auxin-responsive protein family |
Chr3:7055060-7055416 FORWARD LENGTH=118 | 201606
Length = 118
Score = 56.2 bits (134), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 8 SSLKAKFSNNTTRIRKGYLPVYVG-EDRKRYVVPIKYLVYSNFKMLLDEYSDEENLDFDI 66
S A+ N R G+L VYVG E+R+R+V+P KYL Y F+ L+DE +DE F
Sbjct: 37 GSRPARDQNGVPR---GHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVADE----FGY 89
Query: 67 KVDGPIVLHCTTQVFDHVL 85
+G I + C VF+ +L
Sbjct: 90 DHEGGIHIPCEESVFEEIL 108
>AT2G21210.1 | SAUR-like auxin-responsive protein family |
Chr2:9085513-9085809 REVERSE LENGTH=98 | 201606
Length = 98
Score = 53.5 bits (127), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 15 SNNTTRIRKGYLPVYVGE--DRKRYVVPIKYLVYSNFKMLLDEYSDEENLDFDIKVDGPI 72
S+N I KG+L VYVGE ++R+VVP+ YL + F+ LL + EE FD + G +
Sbjct: 22 SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRK--AEEEFGFDHPMGG-L 78
Query: 73 VLHCTTQVF 81
+ CT Q+F
Sbjct: 79 TIPCTEQIF 87
>AT4G34760.1 | SAUR-like auxin-responsive protein family |
Chr4:16582471-16582794 REVERSE LENGTH=107 | 201606
Length = 107
Score = 52.8 bits (125), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 21 IRKGYLPVYVGEDRKRYVVPIKYLVYSNFKMLLDEYSDEENLDFDIKVDGP 71
+ KG+ PVYVGE+R RY+VPI +L + F+ LL +E D D+ + P
Sbjct: 43 VPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIP 93
>AT4G31320.1 | SAUR-like auxin-responsive protein family |
Chr4:15193993-15194562 REVERSE LENGTH=189 | 201606
Length = 189
Score = 54.3 bits (129), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 17 NTTRIRKGYLPVYVGEDRKRYVVPIKYLVYSNFKMLLDEYSDEENLDFDIKVDGPIVLHC 76
+TT I KGYL V VG++ KRY +P +YL + F +LL E +E F + G + + C
Sbjct: 76 DTTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEE----FGFEQAGILRIPC 131
Query: 77 TTQVFDHVLK 86
VF+ +LK
Sbjct: 132 EVAVFESILK 141
>AT1G75580.1 | SAUR-like auxin-responsive protein family |
Chr1:28377530-28377856 FORWARD LENGTH=108 | 201606
Length = 108
Score = 52.8 bits (125), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 2 KMMKMFSSLKAKFSN--------NTTRIRKGYLPVYVGEDRKRYVVPIKYLVYSNFKMLL 53
+++K SSL K SN + + KG+ VYVGE+R RYVVPI +L F++LL
Sbjct: 17 QILKRCSSLGKKQSNVYGEDENGSPLNVPKGHFVVYVGENRVRYVVPISFLTRPEFQLLL 76
Query: 54 DEYSDEENLDFDIKVDGPIVLHCTTQVFDHVLKHLK 89
+ +E D D+ + P C VF + L+
Sbjct: 77 QQAEEEFGFDHDMGLTIP----CEEVVFRSLTSMLR 108