BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0990.1
(105 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20220.1 | SAUR-like auxin-responsive protein family | Chr3:7... 57 1e-11
AT5G18030.1 | SAUR-like auxin-responsive protein family | Chr5:5... 52 9e-10
AT5G18020.1 | SAUR-like auxin-responsive protein family | Chr5:5... 52 9e-10
AT5G18080.1 | SAUR-like auxin-responsive protein family | Chr5:5... 51 1e-09
AT2G21220.1 | SAUR-like auxin-responsive protein family | Chr2:9... 51 2e-09
>AT3G20220.1 | SAUR-like auxin-responsive protein family |
Chr3:7055060-7055416 FORWARD LENGTH=118 | 201606
Length = 118
Score = 57.0 bits (136), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 33 DTTTVHRGFLPIYVG-EDRKRYVVPIKYLVYSKFKMLLDEYSDEENLHFDIKVDGPIVLH 91
D V RG L +YVG E+R+R+V+P KYL Y +F+ L+DE +DE F +G I +
Sbjct: 43 DQNGVPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVADE----FGYDHEGGIHIP 98
Query: 92 CTTQVFDHVV 101
C VF+ ++
Sbjct: 99 CEESVFEEIL 108
>AT5G18030.1 | SAUR-like auxin-responsive protein family |
Chr5:5968527-5968793 FORWARD LENGTH=88 | 201606
Length = 88
Score = 51.6 bits (122), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 26 LLAKDIIDTTTVH---RGFLPIYVGED-RKRYVVPIKYLVYSKFKMLLDEYSDEENLHFD 81
L AK I+ +T +GFL +YVGE +KRY+VP+ YL F+ LL + EE FD
Sbjct: 8 LGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSK--SEEEFGFD 65
Query: 82 IKVDGPIVLHCTTQVFDHVVKHLK 105
+ G + + C F +V L+
Sbjct: 66 HPMGG-LTIPCPEDTFINVTSRLQ 88
>AT5G18020.1 | SAUR-like auxin-responsive protein family |
Chr5:5966305-5966580 REVERSE LENGTH=91 | 201606
Length = 91
Score = 51.6 bits (122), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 25 QLLAKDIIDTTTVHRGFLPIYVGED-RKRYVVPIKYLVYSKFKMLLDEYSDEENLHFDIK 83
++L++ + +GFL +YVGE +KRY+VPI YL F+ LL + EE FD
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSK--SEEEFGFDHP 69
Query: 84 VDGPIVLHCTTQVFDHVVKHLK 105
+ G + + C F +V +
Sbjct: 70 MGG-LTIPCPEDTFINVTSRFQ 90
>AT5G18080.1 | SAUR-like auxin-responsive protein family |
Chr5:5983840-5984112 FORWARD LENGTH=90 | 201606
Length = 90
Score = 51.2 bits (121), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 25 QLLAKDIIDTTTVHRGFLPIYVGED-RKRYVVPIKYLVYSKFKMLLDEYSDEENLHFDIK 83
++L++ + +GFL +YVGE +KRY+VP+ YL F+ LL + EE FD
Sbjct: 12 KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSK--SEEEFGFDHP 69
Query: 84 VDGPIVLHCTTQVFDHVVKHLK 105
+ G + + C F +V L+
Sbjct: 70 MGG-LTIPCPEDTFINVTSRLQ 90
>AT2G21220.1 | SAUR-like auxin-responsive protein family |
Chr2:9089380-9089694 FORWARD LENGTH=104 | 201606
Length = 104
Score = 50.8 bits (120), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 37 VHRGFLPIYVGEDRKRYVVPIKYLVYSKFKMLLDEYSDEENLHFDIKVDGPI 88
V +G P+YVGE R RY+VPI +L + KFK LL + +E + D+ + P
Sbjct: 40 VPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPC 91