BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1000.1
(102 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18080.1 | SAUR-like auxin-responsive protein family | Chr5:5... 53 3e-10
AT3G20220.1 | SAUR-like auxin-responsive protein family | Chr3:7... 53 5e-10
AT5G18020.1 | SAUR-like auxin-responsive protein family | Chr5:5... 52 6e-10
AT5G18050.1 | SAUR-like auxin-responsive protein family | Chr5:5... 50 2e-09
AT5G18010.1 | SAUR-like auxin-responsive protein family | Chr5:5... 50 3e-09
>AT5G18080.1 | SAUR-like auxin-responsive protein family |
Chr5:5983840-5984112 FORWARD LENGTH=90 | 201606
Length = 90
Score = 52.8 bits (125), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 15 QSHFKYDQLLAKDTNNTTTIHKGFLPVYVGEDC-KRYVVPIKYLVYSKFMMLLDEYSDYE 73
+S ++L++ T + KGFL VYVGE KRY+VP+ YL F LL + E
Sbjct: 5 RSLLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSK--SEE 62
Query: 74 NLDFDIKVDGPIVLPCTTKEFDHVLQHLK 102
FD + G + +PC F +V L+
Sbjct: 63 EFGFDHPMGG-LTIPCPEDTFINVTSRLQ 90
>AT3G20220.1 | SAUR-like auxin-responsive protein family |
Chr3:7055060-7055416 FORWARD LENGTH=118 | 201606
Length = 118
Score = 52.8 bits (125), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 25 AKDTNNTTTIHKGFLPVYVG-EDCKRYVVPIKYLVYSKFMMLLDEYSDYENLDFDIKVDG 83
A+D N + +G L VYVG E+ +R+V+P KYL Y +F L+DE +D +F +G
Sbjct: 41 ARDQNG---VPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVAD----EFGYDHEG 93
Query: 84 PIVLPCTTKEFDHVL 98
I +PC F+ +L
Sbjct: 94 GIHIPCEESVFEEIL 108
>AT5G18020.1 | SAUR-like auxin-responsive protein family |
Chr5:5966305-5966580 REVERSE LENGTH=91 | 201606
Length = 91
Score = 52.0 bits (123), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 15 QSHFKYDQLLAKDTNNTTTIHKGFLPVYVGEDC-KRYVVPIKYLVYSKFMMLLDEYSDYE 73
+S ++L++ T + KGFL VYVGE KRY+VPI YL F LL + E
Sbjct: 5 RSLLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSK--SEE 62
Query: 74 NLDFDIKVDGPIVLPCTTKEFDHVLQHLK 102
FD + G + +PC F +V +
Sbjct: 63 EFGFDHPMGG-LTIPCPEDTFINVTSRFQ 90
>AT5G18050.1 | SAUR-like auxin-responsive protein family |
Chr5:5974691-5974963 REVERSE LENGTH=90 | 201606
Length = 90
Score = 50.4 bits (119), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 15 QSHFKYDQLLAKDTNNTTTIHKGFLPVYVGEDC-KRYVVPIKYLVYSKFMMLLDEYSDYE 73
+S ++L++ T + KGFL VYVGE KRY+VP+ YL F LL + D
Sbjct: 5 RSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEF 64
Query: 74 NLDFDIKVDGPIVLPCTTKEFDHVLQHLK 102
D + G + +PC F +V L+
Sbjct: 65 GFDHPM---GGLTIPCHEDTFINVTSRLQ 90
>AT5G18010.1 | SAUR-like auxin-responsive protein family |
Chr5:5963033-5963305 REVERSE LENGTH=90 | 201606
Length = 90
Score = 50.4 bits (119), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 15 QSHFKYDQLLAKDTNNTTTIHKGFLPVYVGEDC-KRYVVPIKYLVYSKFMMLLDEYSDYE 73
+S ++L++ T + KGFL VYVGE KRY+VP+ YL F LL + E
Sbjct: 5 RSLLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSK--SEE 62
Query: 74 NLDFDIKVDGPIVLPCTTKEFDHVLQHLK 102
F + G + +PC F +V L+
Sbjct: 63 EFGFAHPMGG-LTIPCPEDTFINVTSRLQ 90