BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1060.1
(755 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 231 6e-64
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 231 6e-64
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 145 5e-39
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 94 8e-22
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 51 1e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 231 bits (590), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 172/276 (62%), Gaps = 9/276 (3%)
Query: 460 DPTSLNEVKTSSNCEKWIEAMKEELKSMADNDVWDLVELPKGARPIGCKWIFKTKRDSKG 519
+P++ NE K W AM +E+ +M W++ LP +PIGCKW++K K +S G
Sbjct: 85 EPSTYNEAK---EFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 520 NVERYKARLVAKGFTQKEGVDFKETFSPVSTKDSLRIIMALVAHYDLELHQMDVKIAFLN 579
+ERYKARLVAKG+TQ+EG+DF ETFSPV S+++I+A+ A Y+ LHQ+D+ AFLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 580 GNIEETIYMIQPDNFESSSSKQL----VCKLKKSIYGLKQASRQWYQKFDEVITSFGFKE 635
G+++E IYM P + + L VC LKKSIYGLKQASRQW+ KF + FGF +
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 636 NIIDQCIYLKMSGSKFIILVLYVDDILLASSDIGMLHETNVFLSNNFEMKDFGNASFVLG 695
+ D +LK++ + F+ +++YVDDI++ S++ + E L + F+++D G + LG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 696 IQIDRDRSKGILSLSQKAYIDKVLQRFGCRDLYPST 731
++I RS +++ Q+ Y +L G PS+
Sbjct: 322 LEI--ARSAAGINICQRKYALDLLDETGLLGCKPSS 355
Score = 165 bits (418), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 153/286 (53%), Gaps = 11/286 (3%)
Query: 20 FIYLLLYVDDMLISSRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYFN 79
F+ +L+YVDD++I S + +D+LKSQL F+++D+G K LG+EI RS+ +
Sbjct: 277 FLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINIC 334
Query: 80 QKGYIERVVFRFGMQNAKAVSTPLAPHFRLSGRQSPTPTVENDHMDHVPYASAVGSLMYA 139
Q+ Y ++ G+ K S P+ P S D +D Y +G LMY
Sbjct: 335 QRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG------GDFVDAKAYRRLIGRLMYL 388
Query: 140 MVCTRPDISQADSVVSRFMENPGKTHWEAVKCVLRYLKGTIDTGLCFGGDT-CQVSGYVD 198
+ TR DIS A + +S+F E P H +AV +L Y+KGT+ GL + Q+ + D
Sbjct: 389 QI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSD 447
Query: 199 SDYAGDLDRRRSTTAYVFRVHGALVSWRSMLQPTVALSTTEVEYMAMAEGVKETLWLWGL 258
+ + D RRST Y + +L+SW+S Q V+ S+ E EY A++ E +WL
Sbjct: 448 ASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQF 507
Query: 259 LDDLGIK-RECVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFVRD 303
+L + + ++CD+ +AIH+A N V H RTKHI+ H VR+
Sbjct: 508 FRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 231 bits (590), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 172/276 (62%), Gaps = 9/276 (3%)
Query: 460 DPTSLNEVKTSSNCEKWIEAMKEELKSMADNDVWDLVELPKGARPIGCKWIFKTKRDSKG 519
+P++ NE K W AM +E+ +M W++ LP +PIGCKW++K K +S G
Sbjct: 85 EPSTYNEAK---EFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 520 NVERYKARLVAKGFTQKEGVDFKETFSPVSTKDSLRIIMALVAHYDLELHQMDVKIAFLN 579
+ERYKARLVAKG+TQ+EG+DF ETFSPV S+++I+A+ A Y+ LHQ+D+ AFLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 580 GNIEETIYMIQPDNFESSSSKQL----VCKLKKSIYGLKQASRQWYQKFDEVITSFGFKE 635
G+++E IYM P + + L VC LKKSIYGLKQASRQW+ KF + FGF +
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 636 NIIDQCIYLKMSGSKFIILVLYVDDILLASSDIGMLHETNVFLSNNFEMKDFGNASFVLG 695
+ D +LK++ + F+ +++YVDDI++ S++ + E L + F+++D G + LG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 696 IQIDRDRSKGILSLSQKAYIDKVLQRFGCRDLYPST 731
++I RS +++ Q+ Y +L G PS+
Sbjct: 322 LEI--ARSAAGINICQRKYALDLLDETGLLGCKPSS 355
Score = 165 bits (418), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 153/286 (53%), Gaps = 11/286 (3%)
Query: 20 FIYLLLYVDDMLISSRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYFN 79
F+ +L+YVDD++I S + +D+LKSQL F+++D+G K LG+EI RS+ +
Sbjct: 277 FLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINIC 334
Query: 80 QKGYIERVVFRFGMQNAKAVSTPLAPHFRLSGRQSPTPTVENDHMDHVPYASAVGSLMYA 139
Q+ Y ++ G+ K S P+ P S D +D Y +G LMY
Sbjct: 335 QRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG------GDFVDAKAYRRLIGRLMYL 388
Query: 140 MVCTRPDISQADSVVSRFMENPGKTHWEAVKCVLRYLKGTIDTGLCFGGDT-CQVSGYVD 198
+ TR DIS A + +S+F E P H +AV +L Y+KGT+ GL + Q+ + D
Sbjct: 389 QI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSD 447
Query: 199 SDYAGDLDRRRSTTAYVFRVHGALVSWRSMLQPTVALSTTEVEYMAMAEGVKETLWLWGL 258
+ + D RRST Y + +L+SW+S Q V+ S+ E EY A++ E +WL
Sbjct: 448 ASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQF 507
Query: 259 LDDLGIK-RECVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFVRD 303
+L + + ++CD+ +AIH+A N V H RTKHI+ H VR+
Sbjct: 508 FRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 145 bits (365), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 129/235 (54%), Gaps = 11/235 (4%)
Query: 21 IYLLLYVDDMLISSRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYFNQ 80
+YLLLYVDD+L++ S ++ L QLS F MKD+G LG++IK S L+ +Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 81 KGYIERVVFRFGMQNAKAVSTPLAPHFRLSGRQSPTPTVENDHMDHVPYASAVGSLMYAM 140
Y E+++ GM + K +STPL S + P D + S VG+L Y +
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-------DPSDFRSIVGALQY-L 110
Query: 141 VCTRPDISQADSVVSRFMENPGKTHWEAVKCVLRYLKGTIDTGLCFGGDT-CQVSGYVDS 199
TRPDIS A ++V + M P ++ +K VLRY+KGTI GL ++ V + DS
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDS 170
Query: 200 DYAGDLDRRRSTTAYVFRVHGALVSWRSMLQPTVALSTTEVEYMAMAEGVKETLW 254
D+AG RRSTT + + ++SW + QPTV+ S+TE EY A+A E W
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 654 LVLYVDDILLASSDIGMLHETNVFLSNNFEMKDFGNASFVLGIQIDRDRSKGILSLSQKA 713
L+LYVDDILL S +L+ LS+ F MKD G + LGIQI S L LSQ
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTK 60
Query: 714 YIDKVLQRFGCRDLYPSTSVYSGNMTSNV 742
Y +++L G D P ++ + S+V
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSV 89
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 93.6 bits (231), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%)
Query: 476 WIEAMKEELKSMADNDVWDLVELPKGARPIGCKWIFKTKRDSKGNVERYKARLVAKGFTQ 535
W +AM+EEL +++ N W LV P +GCKW+FKTK S G ++R KARLVAKGF Q
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99
Query: 536 KEGVDFKETFSPVSTKDSLRIIMALVAHYDL 566
+EG+ F ET+SPV ++R I+ + ++
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVAQQLEV 130
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 137 MYAMVCTRPDISQADSVVSRFMENPGKTHWEAVKCVLRYLKGTIDTGLCFGGDT-CQVSG 195
MY + TRPD++ A + +S+F +AV VL Y+KGT+ GL + + Q+
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 196 YVDSDYAGDLDRRRSTTAY 214
+ DSD+A D RRS T +
Sbjct: 60 FADSDWASCPDTRRSVTGF 78