BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1070.1
(1094 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 313 4e-90
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 313 4e-90
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 100 3e-24
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 53 5e-08
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 49 1e-05
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 313 bits (801), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/307 (52%), Positives = 211/307 (68%), Gaps = 15/307 (4%)
Query: 762 DIPETPS--RPQRVRRPPPHLDDYICNTGVFPFSSLPSRVRYPLSPSLSATNLSTTHKIF 819
D+PE PS R R P +L DY C+ S+ S + +S LS +S + F
Sbjct: 25 DVPE-PSVHTSHRRTRKPAYLQDYYCH-------SVASLTIHDISQFLSYEKVSPLYHSF 76
Query: 820 LASVLSENEPSSFSQAIKFPHWREAMTKEIHALESNNTWSLITLPHGKRPIGCKWVYKIK 879
L + EPS++++A +F W AM EI A+E+ +TW + TLP K+PIGCKWVYKIK
Sbjct: 77 LVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIK 136
Query: 880 FKPDGSIDRYKARLVAKDYTQIEGLDYHDTFAPVAKLVTVRVLLSLAAIKHWPLHQLDVN 939
+ DG+I+RYKARLVAK YTQ EG+D+ +TF+PV KL +V+++L+++AI ++ LHQLD++
Sbjct: 137 YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196
Query: 940 NAFLQGDLDEEVFMKLPPGYSV-QGE----NRVCRLNKSIYGLKQASRQWFSKFSSALVQ 994
NAFL GDLDEE++MKLPPGY+ QG+ N VC L KSIYGLKQASRQWF KFS L+
Sbjct: 197 NAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIG 256
Query: 995 KGFVQSLSDYSLFSYFKSNIVIHVLVYVDDIIITGNNDLAISELKSFLGKVFSIKDLGNL 1054
GFVQS SD++ F + + + VLVYVDDIII NND A+ ELKS L F ++DLG L
Sbjct: 257 FGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPL 316
Query: 1055 SYFLGIE 1061
YFLG+E
Sbjct: 317 KYFLGLE 323
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 313 bits (801), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/307 (52%), Positives = 211/307 (68%), Gaps = 15/307 (4%)
Query: 762 DIPETPS--RPQRVRRPPPHLDDYICNTGVFPFSSLPSRVRYPLSPSLSATNLSTTHKIF 819
D+PE PS R R P +L DY C+ S+ S + +S LS +S + F
Sbjct: 25 DVPE-PSVHTSHRRTRKPAYLQDYYCH-------SVASLTIHDISQFLSYEKVSPLYHSF 76
Query: 820 LASVLSENEPSSFSQAIKFPHWREAMTKEIHALESNNTWSLITLPHGKRPIGCKWVYKIK 879
L + EPS++++A +F W AM EI A+E+ +TW + TLP K+PIGCKWVYKIK
Sbjct: 77 LVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIK 136
Query: 880 FKPDGSIDRYKARLVAKDYTQIEGLDYHDTFAPVAKLVTVRVLLSLAAIKHWPLHQLDVN 939
+ DG+I+RYKARLVAK YTQ EG+D+ +TF+PV KL +V+++L+++AI ++ LHQLD++
Sbjct: 137 YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196
Query: 940 NAFLQGDLDEEVFMKLPPGYSV-QGE----NRVCRLNKSIYGLKQASRQWFSKFSSALVQ 994
NAFL GDLDEE++MKLPPGY+ QG+ N VC L KSIYGLKQASRQWF KFS L+
Sbjct: 197 NAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIG 256
Query: 995 KGFVQSLSDYSLFSYFKSNIVIHVLVYVDDIIITGNNDLAISELKSFLGKVFSIKDLGNL 1054
GFVQS SD++ F + + + VLVYVDDIII NND A+ ELKS L F ++DLG L
Sbjct: 257 FGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPL 316
Query: 1055 SYFLGIE 1061
YFLG+E
Sbjct: 317 KYFLGLE 323
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 100 bits (250), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 10/124 (8%)
Query: 803 LSPSLSATNLSTTHKIFLASVLSENEPSSFSQAIKFPHWREAMTKEIHALESNNTWSLIT 862
L+P S T +T K EP S A+K P W +AM +E+ AL N TW L+
Sbjct: 12 LNPKYSLTITTTIKK----------EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVP 61
Query: 863 LPHGKRPIGCKWVYKIKFKPDGSIDRYKARLVAKDYTQIEGLDYHDTFAPVAKLVTVRVL 922
P + +GCKWV+K K DG++DR KARLVAK + Q EG+ + +T++PV + T+R +
Sbjct: 62 PPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTI 121
Query: 923 LSLA 926
L++A
Sbjct: 122 LNVA 125
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 516 HRHILEVARSLRIQANLPLSFWGECVLTAVYLINKLPTPILHGISPHEKLLGTPPSFSHI 575
+R I+E RS+ + LP +F + TAV++INK P+ ++ P E + P++S++
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 576 RVFGCLCFARLPSPSTKMDPRA 597
R FGC+ + + K+ PRA
Sbjct: 62 RRFGCVAY--IHCDEGKLKPRA 81
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 36/48 (75%)
Query: 1016 IHVLVYVDDIIITGNNDLAISELKSFLGKVFSIKDLGNLSYFLGIEAQ 1063
+++L+YVDDI++TG+++ ++ L L FS+KDLG + YFLGI+ +
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIK 48