BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1100.1
(201 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 117 2e-30
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 117 2e-30
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 87 8e-21
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 57 1e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 117 bits (293), Expect = 2e-30, Method: Composition-based stats.
Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 3/182 (1%)
Query: 1 MDRVPYASAVGSLMYAMVCTRPDISQAVGMVSRFMANPGKTHWEAVKWVLRYLKGTVDTG 60
+D Y +G LMY + TR DIS AV +S+F P H +AV +L Y+KGTV G
Sbjct: 373 VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 61 LCFGGDT-CQVSGYVDSDYAGDLDRRRSTTGYVFKVHGAPVSWRSMLQSTVALSTTEAEY 119
L + Q+ + D+ + D RRST GY + + +SW+S Q V+ S+ EAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 120 MAMAEGVKEALWLWGLLDDLGIK-QECVDVWCDSQSAIHLAKNQIHHARTKHIDVRYHFV 178
A++ E +WL +L + + ++CD+ +AIH+A N + H RTKHI+ H V
Sbjct: 492 RALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSV 551
Query: 179 RD 180
R+
Sbjct: 552 RE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 117 bits (293), Expect = 2e-30, Method: Composition-based stats.
Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 3/182 (1%)
Query: 1 MDRVPYASAVGSLMYAMVCTRPDISQAVGMVSRFMANPGKTHWEAVKWVLRYLKGTVDTG 60
+D Y +G LMY + TR DIS AV +S+F P H +AV +L Y+KGTV G
Sbjct: 373 VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 61 LCFGGDT-CQVSGYVDSDYAGDLDRRRSTTGYVFKVHGAPVSWRSMLQSTVALSTTEAEY 119
L + Q+ + D+ + D RRST GY + + +SW+S Q V+ S+ EAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 120 MAMAEGVKEALWLWGLLDDLGIK-QECVDVWCDSQSAIHLAKNQIHHARTKHIDVRYHFV 178
A++ E +WL +L + + ++CD+ +AIH+A N + H RTKHI+ H V
Sbjct: 492 RALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSV 551
Query: 179 RD 180
R+
Sbjct: 552 RE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 87.0 bits (214), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Query: 2 DRVPYASAVGSLMYAMVCTRPDISQAVGMVSRFMANPGKTHWEAVKWVLRYLKGTVDTGL 61
D + S VG+L Y + TRPDIS AV +V + M P ++ +K VLRY+KGT+ GL
Sbjct: 96 DPSDFRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL 154
Query: 62 CFGGDT-CQVSGYVDSDYAGDLDRRRSTTGYVFKVHGAPVSWRSMLQSTVALSTTEAEYM 120
++ V + DSD+AG RRSTTG+ + +SW + Q TV+ S+TE EY
Sbjct: 155 YIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYR 214
Query: 121 AMAEGVKEALW 131
A+A E W
Sbjct: 215 ALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 56.6 bits (135), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 14 MYAMVCTRPDISQAVGMVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSG 72
MY + TRPD++ AV +S+F + +AV VL Y+KGTV GL + + Q+
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 73 YVDSDYAGDLDRRRSTTGY 91
+ DSD+A D RRS TG+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78