BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1150.1
(321 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 118 4e-29
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 118 4e-29
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 82 3e-19
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 67 3e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 118 bits (295), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 1/108 (0%)
Query: 214 EAMKSEDSCRAPKGQKIVGSKWVFKKKEGIPGVEDARYKARLVAKGFTQREGIDFNEVFS 273
E + + C P +K +G KWV+K K G + RYKARLVAKG+TQ+EGIDF E FS
Sbjct: 110 ETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFS 168
Query: 274 PVVKHSSIRVILAMVALYDMELEQLDVKTAFLHGELEEQIYMRQPEGF 321
PV K +S+++ILA+ A+Y+ L QLD+ AFL+G+L+E+IYM+ P G+
Sbjct: 169 PVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 118 bits (295), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 1/108 (0%)
Query: 214 EAMKSEDSCRAPKGQKIVGSKWVFKKKEGIPGVEDARYKARLVAKGFTQREGIDFNEVFS 273
E + + C P +K +G KWV+K K G + RYKARLVAKG+TQ+EGIDF E FS
Sbjct: 110 ETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFS 168
Query: 274 PVVKHSSIRVILAMVALYDMELEQLDVKTAFLHGELEEQIYMRQPEGF 321
PV K +S+++ILA+ A+Y+ L QLD+ AFL+G+L+E+IYM+ P G+
Sbjct: 169 PVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 82.4 bits (202), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 49/83 (59%)
Query: 36 MNRTLLERARCMLSNARLPEVFWAEAVNTTAHLVNISPCTSIECKTPNEVLSGYPANYEN 95
MNRT++E+ R ML LP+ F A+A NT H++N P T+I P+EV Y
Sbjct: 1 MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60
Query: 96 LRIFGCSTYAHVKEGKLDPRAKK 118
LR FGC Y H EGKL PRAKK
Sbjct: 61 LRRFGCVAYIHCDEGKLKPRAKK 83
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 67.4 bits (163), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 225 PKGQKIVGSKWVFKKKEGIPGVEDARYKARLVAKGFTQREGIDFNEVFSPVVKHSSIRVI 284
P Q I+G KWVFK K G D R KARLVAKGF Q EGI F E +SPVV+ ++IR I
Sbjct: 63 PVNQNILGCKWVFKTKLHSDGTLD-RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTI 121
Query: 285 L 285
L
Sbjct: 122 L 122