BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1160.1
(150 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 72 1e-15
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 58 3e-10
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 58 3e-10
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 71.6 bits (174), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 26 VYPLLYVDDMLIACKDMSKIHMLKGQLKGEFEMKDLGASRKILGMEIRRDRSARKLFLSQ 85
+Y LLYVDD+L+ + ++ML QL F MKDLG LG++I+ S LFLSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 86 KTYIEKVLERFGMTEAKPVNTPLSAHFKLSGELS 119
Y E++L GM + KP++TPL KL+ +S
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVS 90
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 57.8 bits (138), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 16 YHRKLSNGSYVYPLLYVDDMLIACKDMSKIHMLKGQLKGEFEMKDLGASRKILGMEIRRD 75
Y K++ ++ L+YVDD++I + + + LK QLK F+++DLG + LG+EI
Sbjct: 268 YFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA-- 325
Query: 76 RSARKLFLSQKTYIEKVLERFGMTEAKPVNTPLSAHFKLSG 116
RSA + + Q+ Y +L+ G+ KP + P+ S
Sbjct: 326 RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 57.8 bits (138), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 16 YHRKLSNGSYVYPLLYVDDMLIACKDMSKIHMLKGQLKGEFEMKDLGASRKILGMEIRRD 75
Y K++ ++ L+YVDD++I + + + LK QLK F+++DLG + LG+EI
Sbjct: 268 YFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA-- 325
Query: 76 RSARKLFLSQKTYIEKVLERFGMTEAKPVNTPLSAHFKLSG 116
RSA + + Q+ Y +L+ G+ KP + P+ S
Sbjct: 326 RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366