BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1170.1
(107 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 69 1e-14
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 69 1e-14
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 56 2e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 68.9 bits (167), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 2 DRPGKGHWQAVKWILRYLGGTAELGLVYDRRADTSGSVVGFVDSDFSGDLDRKRSLTGYT 61
+ P H QAV IL Y+ GT GL Y +A+ V F D+ F D +RS GY
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTRRSTNGYC 464
Query: 62 FTLCGSAISWRAVLQSVVALSRTEVEYMAATEAVKEAIWLSGLVQD 107
L S ISW++ Q VV+ S E EY A + A E +WL+ ++
Sbjct: 465 MFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRE 510
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 68.9 bits (167), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 2 DRPGKGHWQAVKWILRYLGGTAELGLVYDRRADTSGSVVGFVDSDFSGDLDRKRSLTGYT 61
+ P H QAV IL Y+ GT GL Y +A+ V F D+ F D +RS GY
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTRRSTNGYC 464
Query: 62 FTLCGSAISWRAVLQSVVALSRTEVEYMAATEAVKEAIWLSGLVQD 107
L S ISW++ Q VV+ S E EY A + A E +WL+ ++
Sbjct: 465 MFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRE 510
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 55.8 bits (133), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 1 MDRPGKGHWQAVKWILRYLGGTAELGLVYDRRADTSGSVVGFVDSDFSGDLDRKRSLTGY 60
M P + +K +LRY+ GT GL + ++ +V F DSD++G +RS TG+
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHK--NSKLNVQAFCDSDWAGCTSTRRSTTGF 185
Query: 61 TFTLCGSAISWRAVLQSVVALSRTEVEYMAATEAVKEAIWLSG 103
L + ISW A Q V+ S TE EY A E W S
Sbjct: 186 CTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSSA 228