BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1250.1
(270 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53670.1 | transmembrane protein | Chr5:21796997-21797731 FOR... 95 5e-23
>AT5G53670.1 | transmembrane protein | Chr5:21796997-21797731
FORWARD LENGTH=244 | 201606
Length = 244
Score = 94.7 bits (234), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 27/214 (12%)
Query: 1 MNNIPVLNGTNFKKWKKHVMIVLGCMDLDVALRTDRPAPLTDLSNSEQRVAFEKWERSDR 60
+++IP+L+G+NF +WK+H+++VL MDLD++L T+RP+ +L + W+RS+R
Sbjct: 35 VDSIPMLSGSNFSEWKEHLLLVLALMDLDLSLMTERPSSPKELKH---------WDRSNR 85
Query: 61 MSLMIMQNSIPDSISSGLTE--TSAKEFLKQLSDRFTASEKVEISTALTKLVTMRYKGKG 118
+S+MIM+ IP + + T+AK+FL L + F +E+ E S + +M Y
Sbjct: 86 VSIMIMKIRIPQGFRGVVPDDVTTAKDFLASLENFFAKNEEAERSRVQAESSSMSYIENE 145
Query: 119 NIREYIMEKSNLVSKLRELRLE--LSED-ILVHLILISLPAQYNTLKISYNTQKDK---- 171
N+RE IM L +K + L + S D +L H + LP QY +LK Y+ + K
Sbjct: 146 NVRELIMRMKTLGAKRKRLGINNIFSNDMMLAHCAVKMLPLQYISLKNVYSCLEGKFVNE 205
Query: 172 ---------WSLNELIAQCVQEEERINREMSESA 196
WS ELI++C EEE + E+++ A
Sbjct: 206 NGRWHTGEIWSTKELISRCDMEEETLRTEIADEA 239