BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1270.1
(718 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 337 e-102
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 337 e-102
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 130 6e-34
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 94 7e-22
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 55 7e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 337 bits (863), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/484 (36%), Positives = 279/484 (57%), Gaps = 18/484 (3%)
Query: 192 DPTSLNEVKTSSNCKKWIEAMKEELKSMADNDVWDLVELPKGARPIGCKWIFKTKRDSKG 251
+P++ NE K W AM +E+ +M W++ LP +PIGCKW++K K +S G
Sbjct: 85 EPSTYNEAK---EFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 252 NVERYKARLVAKGFTQKEGVDFKETFSPVSTKDSLRIIMALVAHYDLELHQMDVKTTFLN 311
+ERYKARLVAKG+TQ+EG+DF ETFSPV S+++I+A+ A Y+ LHQ+D+ FLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 312 GNIEETIYMIQPDNFESSSSKQL----VCKLKKSIYGLKQASRQWYRKFDEVITSFGFKE 367
G+++E IYM P + + L VC LKKSIYGLKQASRQW+ KF + FGF +
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 368 NIIDQCIYLKTSGSKFIILVLYVDDILLASSDIGMLHETKVFLSNNFEMKDLGNASFVLG 427
+ D +LK + + F+ +++YVDDI++ S++ + E K L + F+++DLG + LG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 428 IQIDRDRSKGILSLSQKAYIDKVLQRFGMEKCSPGDTPVAKGDKFSLLQCPKLNLEKKEM 487
++I RS +++ Q+ Y +L G+ C P P+ FS +
Sbjct: 322 LEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF------V 373
Query: 488 ETIPYSSAVGSLMYAQVCTRPDLAFIVGMLGRYLSNPGLDHWKAVKRVMRYLQRTKDYKL 547
+ Y +G LMY Q+ TR D++F V L ++ P L H +AV +++ Y++ T L
Sbjct: 374 DAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 548 TFRRNDHLEIVGYSDSDFAGCIDSRKSTSGYIYMMAGGAISWKSVKQTLIASSPMEAEFI 607
+ +++ +SD+ F C D+R+ST+GY + ISWKS KQ +++ S EAE+
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492
Query: 608 ACFEASNHAIWLRNFVSNLKLVDNIERPMKIYCDNKAAELYSKNNRSSSKSKYIDIKYLA 667
A A++ +WL F L+L + +P ++CDN AA + N ++K+I+ +
Sbjct: 493 ALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHS 550
Query: 668 VKDR 671
V++R
Sbjct: 551 VRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 337 bits (863), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/484 (36%), Positives = 279/484 (57%), Gaps = 18/484 (3%)
Query: 192 DPTSLNEVKTSSNCKKWIEAMKEELKSMADNDVWDLVELPKGARPIGCKWIFKTKRDSKG 251
+P++ NE K W AM +E+ +M W++ LP +PIGCKW++K K +S G
Sbjct: 85 EPSTYNEAK---EFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 252 NVERYKARLVAKGFTQKEGVDFKETFSPVSTKDSLRIIMALVAHYDLELHQMDVKTTFLN 311
+ERYKARLVAKG+TQ+EG+DF ETFSPV S+++I+A+ A Y+ LHQ+D+ FLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 312 GNIEETIYMIQPDNFESSSSKQL----VCKLKKSIYGLKQASRQWYRKFDEVITSFGFKE 367
G+++E IYM P + + L VC LKKSIYGLKQASRQW+ KF + FGF +
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 368 NIIDQCIYLKTSGSKFIILVLYVDDILLASSDIGMLHETKVFLSNNFEMKDLGNASFVLG 427
+ D +LK + + F+ +++YVDDI++ S++ + E K L + F+++DLG + LG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 428 IQIDRDRSKGILSLSQKAYIDKVLQRFGMEKCSPGDTPVAKGDKFSLLQCPKLNLEKKEM 487
++I RS +++ Q+ Y +L G+ C P P+ FS +
Sbjct: 322 LEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF------V 373
Query: 488 ETIPYSSAVGSLMYAQVCTRPDLAFIVGMLGRYLSNPGLDHWKAVKRVMRYLQRTKDYKL 547
+ Y +G LMY Q+ TR D++F V L ++ P L H +AV +++ Y++ T L
Sbjct: 374 DAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 548 TFRRNDHLEIVGYSDSDFAGCIDSRKSTSGYIYMMAGGAISWKSVKQTLIASSPMEAEFI 607
+ +++ +SD+ F C D+R+ST+GY + ISWKS KQ +++ S EAE+
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492
Query: 608 ACFEASNHAIWLRNFVSNLKLVDNIERPMKIYCDNKAAELYSKNNRSSSKSKYIDIKYLA 667
A A++ +WL F L+L + +P ++CDN AA + N ++K+I+ +
Sbjct: 493 ALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHS 550
Query: 668 VKDR 671
V++R
Sbjct: 551 VRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 130 bits (327), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 122/236 (51%), Gaps = 16/236 (6%)
Query: 386 LVLYVDDILLASSDIGMLHETKVFLSNNFEMKDLGNASFVLGIQIDRDRSKGILSLSQKA 445
L+LYVDDILL S +L+ LS+ F MKDLG + LGIQI S L LSQ
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTK 60
Query: 446 YIDKVLQRFGMEKCSPGDTPVAKGDKFSLLQCPKLNLE---KKEMETIPYSSAVGSLMYA 502
Y +++L GM C P TP+ KLN K + + S VG+L Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPL----------KLNSSVSTAKYPDPSDFRSIVGALQYL 110
Query: 503 QVCTRPDLAFIVGMLGRYLSNPGLDHWKAVKRVMRYLQRTKDYKLTFRRNDHLEIVGYSD 562
+ TRPD+++ V ++ + + P L + +KRV+RY++ T + L +N L + + D
Sbjct: 111 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 169
Query: 563 SDFAGCIDSRKSTSGYIYMMAGGAISWKSVKQTLIASSPMEAEFIACFEASNHAIW 618
SD+AGC +R+ST+G+ + ISW + +Q ++ S E E+ A + W
Sbjct: 170 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 93.6 bits (231), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%)
Query: 208 WIEAMKEELKSMADNDVWDLVELPKGARPIGCKWIFKTKRDSKGNVERYKARLVAKGFTQ 267
W +AM+EEL +++ N W LV P +GCKW+FKTK S G ++R KARLVAKGF Q
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99
Query: 268 KEGVDFKETFSPVSTKDSLRIIMALVAHYDL 298
+EG+ F ET+SPV ++R I+ + ++
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVAQQLEV 130
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 54.7 bits (130), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 500 MYAQVCTRPDLAFIVGMLGRYLSNPGLDHWKAVKRVMRYLQRTKDYKLTFRRNDHLEIVG 559
MY + TRPDL F V L ++ S +AV +V+ Y++ T L + L++
Sbjct: 1 MYLTI-TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 560 YSDSDFAGCIDSRKSTSGY 578
++DSD+A C D+R+S +G+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78