BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1280.1
(272 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26560.1 | ATP-dependent RNA helicase | Chr3:9750122-9753719 ... 87 8e-19
AT2G24500.1 | Zinc finger protein 622 | Chr2:10401259-10402805 R... 44 6e-05
>AT3G26560.1 | ATP-dependent RNA helicase | Chr3:9750122-9753719
REVERSE LENGTH=1168 | 201606
Length = 1168
Score = 86.7 bits (213), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 78/150 (52%), Gaps = 31/150 (20%)
Query: 148 KQILPIKKSYV--DKFPTNPQL-SNHGTITKTRLSGNKIIEEAEKVPSRRPFKRLSSRGK 204
+ ++P++K D +NP + G +TKT +SG +I+EE + PSRRP K++SS +
Sbjct: 291 RDLIPLRKPSDEDDSSRSNPSYRTKDGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPER 350
Query: 205 WK-----EDGAEEELEIELYD-----------------------DEPMFLQEQTRYSTDM 236
W+ G E +YD DEP FLQ QTRYS DM
Sbjct: 351 WEAKQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDM 410
Query: 237 SQVKIFKKLGGALGRSAAHQSGLLKEPREL 266
S VKIFK G+L R+AA QS L KE RE+
Sbjct: 411 SPVKIFKNPEGSLSRAAALQSALTKERREM 440
>AT2G24500.1 | Zinc finger protein 622 | Chr2:10401259-10402805
REVERSE LENGTH=395 | 201606
Length = 395
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 117 FEGESQQKLNCKSECHCHNLKRKVKGVPGVTKQILPIKKSYV 158
FE +++QK + KSE H +NLKRK+ GVPGVT+ + +++ +
Sbjct: 13 FEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAI 54