BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1300.1
(362 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 162 9e-44
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 162 9e-44
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 87 2e-19
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 52 2e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 162 bits (409), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 63/384 (16%)
Query: 1 MALVAHYDLELHQMNVKTTFLNGNIEETIYIVQPDNFESSSSKQL----VCKLKKSIYGL 56
+A+ A Y+ LHQ+++ FLNG+++E IY+ P + + L VC LKKSIYGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239
Query: 57 KQASHQWYRKFDEVVTSFGFKENIIDQCIYLKMSGSKFIILVL----------------- 99
KQAS QW+ KF + FGF ++ D +LK++ + F+ +++
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDE 299
Query: 100 ---------------------------------LSQKAYIGKVLQRFGMEKCSPGDTSVA 126
+ Q+ Y +L G+ C P +
Sbjct: 300 LKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD 359
Query: 127 KGDKFSLLQCPKLNLEKKEMEMIPYSSAVGSLMYAQVCTRPDLAFIVGMLGRYLSNPGLD 186
FS ++ Y +G LMY Q+ TR D++F V L ++ P L
Sbjct: 360 PSVTFSAHSGGDF------VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLA 412
Query: 187 HWKVVKRVMRYLQRTKDYKLTFRRTDHLEIVGYSDSDFAGCIDSRKPTSGYIYRMAGGAI 246
H + V +++ Y++ T L + +++ +SD+ F C D+R+ T+GY + I
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLI 472
Query: 247 SWKSVKQTLIASSAMEAEFIACFEASNHAIWLRNFVSNLKLVDNIERPMKIYYDNKAAEL 306
SWKS KQ +++ S+ EAE+ A A++ +WL F L+L + +P ++ DN AA
Sbjct: 473 SWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIH 530
Query: 307 YSKNNRSSSKSKYIDIKYLAVKDR 330
+ N ++K+I+ +V++R
Sbjct: 531 IATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 162 bits (409), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 63/384 (16%)
Query: 1 MALVAHYDLELHQMNVKTTFLNGNIEETIYIVQPDNFESSSSKQL----VCKLKKSIYGL 56
+A+ A Y+ LHQ+++ FLNG+++E IY+ P + + L VC LKKSIYGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239
Query: 57 KQASHQWYRKFDEVVTSFGFKENIIDQCIYLKMSGSKFIILVL----------------- 99
KQAS QW+ KF + FGF ++ D +LK++ + F+ +++
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDE 299
Query: 100 ---------------------------------LSQKAYIGKVLQRFGMEKCSPGDTSVA 126
+ Q+ Y +L G+ C P +
Sbjct: 300 LKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD 359
Query: 127 KGDKFSLLQCPKLNLEKKEMEMIPYSSAVGSLMYAQVCTRPDLAFIVGMLGRYLSNPGLD 186
FS ++ Y +G LMY Q+ TR D++F V L ++ P L
Sbjct: 360 PSVTFSAHSGGDF------VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLA 412
Query: 187 HWKVVKRVMRYLQRTKDYKLTFRRTDHLEIVGYSDSDFAGCIDSRKPTSGYIYRMAGGAI 246
H + V +++ Y++ T L + +++ +SD+ F C D+R+ T+GY + I
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLI 472
Query: 247 SWKSVKQTLIASSAMEAEFIACFEASNHAIWLRNFVSNLKLVDNIERPMKIYYDNKAAEL 306
SWKS KQ +++ S+ EAE+ A A++ +WL F L+L + +P ++ DN AA
Sbjct: 473 SWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIH 530
Query: 307 YSKNNRSSSKSKYIDIKYLAVKDR 330
+ N ++K+I+ +V++R
Sbjct: 531 IATNAVFHERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 87.0 bits (214), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 98 VLLSQKAYIGKVLQRFGMEKCSPGDTSVAKGDKFSLLQCPKLNLE---KKEMEMIPYSSA 154
+ LSQ Y ++L GM C P T + KLN K + + S
Sbjct: 54 LFLSQTKYAEQILNNAGMLDCKPMSTPLPL----------KLNSSVSTAKYPDPSDFRSI 103
Query: 155 VGSLMYAQVCTRPDLAFIVGMLGRYLSNPGLDHWKVVKRVMRYLQRTKDYKLTFRRTDHL 214
VG+L Y + TRPD+++ V ++ + + P L + ++KRV+RY++ T + L + L
Sbjct: 104 VGALQYLTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKL 162
Query: 215 EIVGYSDSDFAGCIDSRKPTSGYIYRMAGGAISWKSVKQTLIASSAMEAEFIACFEASNH 274
+ + DSD+AGC +R+ T+G+ + ISW + +Q ++ S+ E E+ A +
Sbjct: 163 NVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAE 222
Query: 275 AIW 277
W
Sbjct: 223 LTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 52.4 bits (124), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 159 MYAQVCTRPDLAFIVGMLGRYLSNPGLDHWKVVKRVMRYLQRTKDYKLTFRRTDHLEIVG 218
MY + TRPDL F V L ++ S + V +V+ Y++ T L + T L++
Sbjct: 1 MYLTI-TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 219 YSDSDFAGCIDSRKPTSGY 237
++DSD+A C D+R+ +G+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78