BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1330.1
(629 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 453 e-147
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 453 e-147
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 188 2e-55
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 106 2e-26
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 79 2e-17
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 453 bits (1166), Expect = e-147, Method: Compositional matrix adjust.
Identities = 238/570 (41%), Positives = 356/570 (62%), Gaps = 37/570 (6%)
Query: 72 LPDSSPQSGNPSPPLVSNIVPSRYPTREGHMPSRYLLTCS--TNHPISEYLSYQGISSQY 129
+P ++ Q+ P P + ++ +R P ++ Y + + T H IS++LSY+ +S Y
Sbjct: 17 MPSANIQNDVPEPSVHTSHRRTRKP---AYLQDYYCHSVASLTIHDISQFLSYEKVSPLY 73
Query: 130 QYFIAQVDSISIPRSVHDALQNPNWVAAMQVEMDALQHNQTWELVALPPGERTVGCKWVF 189
F+ + P + ++A + W AM E+ A++ TWE+ LPP ++ +GCKWV+
Sbjct: 74 HSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVY 133
Query: 190 SLKYMEDGTIDRYKARLVAKGFTQVPGKDFGATFAPVAKLTTVRLLVSLAASYSWPLYQL 249
+KY DGTI+RYKARLVAKG+TQ G DF TF+PV KLT+V+L+++++A Y++ L+QL
Sbjct: 134 KIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQL 193
Query: 250 D-------GE------------YSGK---------VCRLRKSLYGLKQSPKAWFNRFSDV 281
D G+ Y+ + VC L+KS+YGLKQ+ + WF +FS
Sbjct: 194 DISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVT 253
Query: 282 VQTLGFVRCHSDHTCFIRRHREGKCIILSVYVDDIIITGDDSFGIVQIKKALGKFFEIKD 341
+ GFV+ HSDHT F++ +L VYVDDIII ++ + ++K L F+++D
Sbjct: 254 LIGFGFVQSHSDHTYFLKITATLFLCVL-VYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 342 LGLLRYFLGIEVARSSSGISVSQRKYALDLLQDTGMLGSRPASTPMDPNLKLTTESGELL 401
LG L+YFLG+E+ARS++GI++ QRKYALDLL +TG+LG +P+S PMDP++ + SG
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372
Query: 402 PDPSQYQRLVGRLIYLTNTRPDLTYAVSVVSQFMHSPGTAHLDAVYHILRYLKTCPGLGL 461
D Y+RL+GRL+YL TR D+++AV+ +SQF +P AH AV IL Y+K G GL
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 462 FYVTSPQSGLSCFTDADYAGSKDDRRSTSGICVFHGGHLIAWKSKKQAGVSRSSAESEYR 521
FY + + L F+DA + KD RRST+G C+F G LI+WKSKKQ VS+SSAE+EYR
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492
Query: 522 AMAQGTCEIIWLRSLLTELGFAETMSSTLFCDNKSAIMLSSDSVLHERTKHIEVDIHFIR 581
A++ T E++WL EL + + LFCDN +AI +++++V HERTKHIE D H +R
Sbjct: 493 ALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVR 552
Query: 582 EK-MRSGVIKPNFVSSANQTADMFTKSVGP 610
E+ + + +F + Q D FT+ + P
Sbjct: 553 ERSVYQATLSYSFQAYDEQ--DGFTEYLSP 580
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 453 bits (1166), Expect = e-147, Method: Compositional matrix adjust.
Identities = 238/570 (41%), Positives = 356/570 (62%), Gaps = 37/570 (6%)
Query: 72 LPDSSPQSGNPSPPLVSNIVPSRYPTREGHMPSRYLLTCS--TNHPISEYLSYQGISSQY 129
+P ++ Q+ P P + ++ +R P ++ Y + + T H IS++LSY+ +S Y
Sbjct: 17 MPSANIQNDVPEPSVHTSHRRTRKP---AYLQDYYCHSVASLTIHDISQFLSYEKVSPLY 73
Query: 130 QYFIAQVDSISIPRSVHDALQNPNWVAAMQVEMDALQHNQTWELVALPPGERTVGCKWVF 189
F+ + P + ++A + W AM E+ A++ TWE+ LPP ++ +GCKWV+
Sbjct: 74 HSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVY 133
Query: 190 SLKYMEDGTIDRYKARLVAKGFTQVPGKDFGATFAPVAKLTTVRLLVSLAASYSWPLYQL 249
+KY DGTI+RYKARLVAKG+TQ G DF TF+PV KLT+V+L+++++A Y++ L+QL
Sbjct: 134 KIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQL 193
Query: 250 D-------GE------------YSGK---------VCRLRKSLYGLKQSPKAWFNRFSDV 281
D G+ Y+ + VC L+KS+YGLKQ+ + WF +FS
Sbjct: 194 DISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVT 253
Query: 282 VQTLGFVRCHSDHTCFIRRHREGKCIILSVYVDDIIITGDDSFGIVQIKKALGKFFEIKD 341
+ GFV+ HSDHT F++ +L VYVDDIII ++ + ++K L F+++D
Sbjct: 254 LIGFGFVQSHSDHTYFLKITATLFLCVL-VYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 342 LGLLRYFLGIEVARSSSGISVSQRKYALDLLQDTGMLGSRPASTPMDPNLKLTTESGELL 401
LG L+YFLG+E+ARS++GI++ QRKYALDLL +TG+LG +P+S PMDP++ + SG
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372
Query: 402 PDPSQYQRLVGRLIYLTNTRPDLTYAVSVVSQFMHSPGTAHLDAVYHILRYLKTCPGLGL 461
D Y+RL+GRL+YL TR D+++AV+ +SQF +P AH AV IL Y+K G GL
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 462 FYVTSPQSGLSCFTDADYAGSKDDRRSTSGICVFHGGHLIAWKSKKQAGVSRSSAESEYR 521
FY + + L F+DA + KD RRST+G C+F G LI+WKSKKQ VS+SSAE+EYR
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492
Query: 522 AMAQGTCEIIWLRSLLTELGFAETMSSTLFCDNKSAIMLSSDSVLHERTKHIEVDIHFIR 581
A++ T E++WL EL + + LFCDN +AI +++++V HERTKHIE D H +R
Sbjct: 493 ALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVR 552
Query: 582 EK-MRSGVIKPNFVSSANQTADMFTKSVGP 610
E+ + + +F + Q D FT+ + P
Sbjct: 553 ERSVYQATLSYSFQAYDEQ--DGFTEYLSP 580
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 188 bits (478), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 140/226 (61%), Gaps = 1/226 (0%)
Query: 307 IILSVYVDDIIITGDDSFGIVQIKKALGKFFEIKDLGLLRYFLGIEVARSSSGISVSQRK 366
+ L +YVDDI++TG + + + L F +KDLG + YFLGI++ SG+ +SQ K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 367 YALDLLQDTGMLGSRPASTPMDPNLKLTTESGELLPDPSQYQRLVGRLIYLTNTRPDLTY 426
YA +L + GML +P STP+ L + + + PDPS ++ +VG L YLT TRPD++Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISY 119
Query: 427 AVSVVSQFMHSPGTAHLDAVYHILRYLKTCPGLGLFYVTSPQSGLSCFTDADYAGSKDDR 486
AV++V Q MH P A D + +LRY+K GL+ + + + F D+D+AG R
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 487 RSTSGICVFHGGHLIAWKSKKQAGVSRSSAESEYRAMAQGTCEIIW 532
RST+G C F G ++I+W +K+Q VSRSS E+EYRA+A E+ W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 106 bits (265), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 66/98 (67%)
Query: 142 PRSVHDALQNPNWVAAMQVEMDALQHNQTWELVALPPGERTVGCKWVFSLKYMEDGTIDR 201
P+SV AL++P W AMQ E+DAL N+TW LV P + +GCKWVF K DGT+DR
Sbjct: 28 PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87
Query: 202 YKARLVAKGFTQVPGKDFGATFAPVAKLTTVRLLVSLA 239
KARLVAKGF Q G F T++PV + T+R ++++A
Sbjct: 88 LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 79.0 bits (193), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 415 IYLTNTRPDLTYAVSVVSQFMHSPGTAHLDAVYHILRYLKTCPGLGLFYVTSPQSGLSCF 474
+YLT TRPDLT+AV+ +SQF + TA + AVY +L Y+K G GLFY + L F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 475 TDADYAGSKDDRRSTSGIC 493
D+D+A D RRS +G C
Sbjct: 61 ADSDWASCPDTRRSVTGFC 79