BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1360.1
(185 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 55 5e-09
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 54 1e-08
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 50 9e-08
AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 48 9e-07
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 54.7 bits (130), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 15 LDSLITNKCR------EKPKQHKWSPPSTPYLKVNVDASFTTLSEPAGIGCVIHDAEANF 68
LD+ +TN+ + + + KWSPP LK N DAS + +G+G ++ +++
Sbjct: 82 LDNTMTNEQQNGNRNADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTV 141
Query: 69 IIAATDSGRGQ-NVEECESLAIHNNILWAIDMCIQYVH----IESENLNPVEYINNKSDG 123
I +G+ EE E + ++WAI + H E +N IN KS
Sbjct: 142 IECGMGKFQGRMTTEEAEC----STLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSN 197
Query: 124 LRWQSKKVIERTLALKDQFTDIVFSYTPRECNTKYDALAKWG-RNHGQKKIWNVIPPFIS 182
R Q ++ + F I FS+ RE N D LAK + + Q +++ P F+S
Sbjct: 198 PRLQ--HFLDTIQSWIPSFESIEFSFKHREQNGCADFLAKQAIKENTQWSLFHSCPYFLS 255
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 23 CREKPKQHK-----WSPPSTPYLKVNVDASFTTLSEPAGIGCVIHDAEANF-IIAATDSG 76
C KP+ ++ W PP ++K N DA++ +E GIG V+ + + + A
Sbjct: 406 CGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALP 465
Query: 77 RGQNVEECESLAIHNNILWAIDMCIQYVHIESENLNPVEYINNKSDGLRWQSKKVIERTL 136
+ ++V E E A+ +L YV ES++ +E +NN D + K I+
Sbjct: 466 KLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNN--DEIWPSLKPTIQDLQ 523
Query: 137 ALKDQFTDIVFSYTPRECNTKYDALAK 163
L QFT++ F + PRE NT + +A+
Sbjct: 524 RLLSQFTEVKFVFIPREGNTLAERVAR 550
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 50.4 bits (119), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 4/153 (2%)
Query: 31 KWSPPSTPYLKVNVDASFTTLSEPAGIGCVIHDAEANFIIAATDSGRG-QNVEECESLAI 89
KW P ++K N D S + +G+ +I +++ + +G Q ++E E A+
Sbjct: 29 KWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQGRQTIKEAECTAL 88
Query: 90 HNNILWAIDMCIQYVHIESENLNPVEYINNKSDGLRWQSKKVIERTLALKDQFTDIVFSY 149
I A D+ + V E +N+ I NK R + +E FT + F++
Sbjct: 89 IWAIQCAWDLGYRRVEFEGDNITVNRLIRNKETNPR--LRYYLEFIQQWSKAFTTVKFTF 146
Query: 150 TPRECNTKYDALAKWG-RNHGQKKIWNVIPPFI 181
RE N D LAK NH +++ P F+
Sbjct: 147 RHREQNVCVDVLAKKAVANHINHTLYHFCPRFL 179
>AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:1535561-1536226 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 47.8 bits (112), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 19 ITNKCREKPKQH-KWSPPSTPYLKVNVDASFTTLSEPAGIGCVIHDAEANFIIAATDSGR 77
+ C + H KW P ++K N D SF ++ G +I D + + AA G
Sbjct: 49 VREGCNNRESTHQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKGFYKGAAQAVGG 108
Query: 78 GQN---VEECESLAIHNNILWAIDMCIQYVHIESENLNPVEYINNKSDGLRWQSKKVIER 134
N E ++L + W+ + V E ++ E +N K + + + I
Sbjct: 109 TMNNALESELQALVMAMQHTWS--QGYRKVIFEGDSKQVEELLNRKQ--MHFGAFNWIRE 164
Query: 135 TLALKDQFTDIVFSYTPRECNTKYDALAK 163
+ +F +++FS+TPR N D LAK
Sbjct: 165 AWSWSKRFEEVIFSWTPRTNNQPADMLAK 193