BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000066.1_g1380.1
         (244 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G20520.1 | RNA binding / RNA-directed DNA polymerase | Chr4:1...    86   5e-19
ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase...    59   7e-11

>AT4G20520.1 | RNA binding / RNA-directed DNA polymerase |
           Chr4:11045912-11047716 FORWARD LENGTH=376 | 201606
          Length = 376

 Score = 85.5 bits (210), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 5/126 (3%)

Query: 1   MANRLKIILLDLIAPFQAAYVPGRQITDNILISQELTHSFKKIRGSKSYFGLNLDMAKAF 60
           M  RLK ++ +LI P QA+++PGR  TDNI+  QE  HS ++ +G K +  L LD+ KA+
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60

Query: 61  DRIEWNYLKKIMHLMGFSTQWINLINSCLTTSIMVVLINGRPGSAF--NVSR---GIRQG 115
           DRI W+YL+  +   GF   W+  I      +  V    GR  ++    VS    G R  
Sbjct: 61  DRIRWDYLEDTLISAGFPEVWLPEIARSTFGARRVAPEVGRADASKRPRVSDHRWGFRYD 120

Query: 116 DPLSPF 121
           D  +PF
Sbjct: 121 DMAAPF 126


>ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase) |
           ChrM:310514-310882 FORWARD LENGTH=122 | 201606
          Length = 122

 Score = 58.5 bits (140), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 39/70 (55%)

Query: 94  MVVLINGRPGSAFNVSRGIRQGDPLSPFLFATAMEGLIRLLEHNNNQNPFIGFPIPNSNL 153
           ++ +ING P      SRG+RQGDPLSP+LF    E L  L      Q    G  + N++ 
Sbjct: 10  LLFIINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSP 69

Query: 154 VIKHLLFADD 163
            I HLLFADD
Sbjct: 70  RINHLLFADD 79

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