BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1550.1
(119 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 45 2e-06
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 45.4 bits (106), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 2 GISLIAHNADSKYIEAHAKSTRAR-NSEESEAMAILFGVEWAKEKNHKSIIIESDNINLI 60
G+ I N+ IE + R +EE+E +++ ++ + HK +I E DN +
Sbjct: 129 GLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIWAIQASYGFGHKKVIFEGDNQTIT 188
Query: 61 KHLHNKRHSVHWQSLIHIKKIRENRKNFDAVQFKYIRRILNSNADKLARWARKKN 115
+ ++ K + Q + I+ +F++++F + R N AD LA+ A K+N
Sbjct: 189 RMINTKSSNPRLQHF--LDTIQSWIPSFESIEFSFKHREQNGCADFLAKQAIKEN 241