BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1600.1
(1362 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 402 e-120
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 402 e-120
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 241 3e-72
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 133 2e-35
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 92 7e-22
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 402 bits (1034), Expect = e-120, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 283/421 (67%), Gaps = 4/421 (0%)
Query: 917 EPKSYKTAIKDPKWKQAMEEEFQALLKNGTWSLIPRTTHMNVLGCKWVFKVKCHSDGSLQ 976
EP +Y A + W AM++E A+ TW + + +GCKWV+K+K +SDG+++
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 977 RYKARLVAQGYNQQEGIDYMETFSPVVKIQTIRVVLTLAISRHWPIQQLDVSNAFLHGHL 1036
RYKARLVA+GY QQEGID++ETFSPV K+ +++++L ++ ++ + QLD+SNAFL+G L
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 1037 TETIYMRQPPGFS----DPQYPNHVCHLHKAIYGLKQAPRAWFTRFASYLLNWGFSKSAS 1092
E IYM+ PPG++ D PN VC+L K+IYGLKQA R WF +F+ L+ +GF +S S
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 1093 DTSMFVFQSGEHMMVLLLYVDDIILTGTSDSLLDQLLAVLATEFAMKRLGHLHYFLGIEV 1152
D + F+ + + +L+YVDDII+ +D+ +D+L + L + F ++ LG L YFLG+E+
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 1153 SRKPSSLFLTQTKYILELLDKSGLSDSKPSLVPISAGKKVSKLDGELIDNPIFYRSMVGG 1212
+R + + + Q KY L+LLD++GL KPS VP+ S G + YR ++G
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGR 384
Query: 1213 LQYATMTRPDLTYSVNYLSQFMHEPRTSHLILLKKVLRYLKGTVGGGILLKSGDVSMLQA 1272
L Y +TR D++++VN LSQF PR +H + K+L Y+KGTVG G+ S LQ
Sbjct: 385 LMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444
Query: 1273 FSDSNWGGCPDTRRSTSGYCVFLGSSLVSWSSKKQTTVSRSSTEAEYRALSLATSELLWM 1332
FSD+++ C DTRRST+GYC+FLG+SL+SW SKKQ VS+SS EAEYRALS AT E++W+
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504
Query: 1333 S 1333
+
Sbjct: 505 A 505
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 402 bits (1034), Expect = e-120, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 283/421 (67%), Gaps = 4/421 (0%)
Query: 917 EPKSYKTAIKDPKWKQAMEEEFQALLKNGTWSLIPRTTHMNVLGCKWVFKVKCHSDGSLQ 976
EP +Y A + W AM++E A+ TW + + +GCKWV+K+K +SDG+++
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 977 RYKARLVAQGYNQQEGIDYMETFSPVVKIQTIRVVLTLAISRHWPIQQLDVSNAFLHGHL 1036
RYKARLVA+GY QQEGID++ETFSPV K+ +++++L ++ ++ + QLD+SNAFL+G L
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 1037 TETIYMRQPPGFS----DPQYPNHVCHLHKAIYGLKQAPRAWFTRFASYLLNWGFSKSAS 1092
E IYM+ PPG++ D PN VC+L K+IYGLKQA R WF +F+ L+ +GF +S S
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 1093 DTSMFVFQSGEHMMVLLLYVDDIILTGTSDSLLDQLLAVLATEFAMKRLGHLHYFLGIEV 1152
D + F+ + + +L+YVDDII+ +D+ +D+L + L + F ++ LG L YFLG+E+
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 1153 SRKPSSLFLTQTKYILELLDKSGLSDSKPSLVPISAGKKVSKLDGELIDNPIFYRSMVGG 1212
+R + + + Q KY L+LLD++GL KPS VP+ S G + YR ++G
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGR 384
Query: 1213 LQYATMTRPDLTYSVNYLSQFMHEPRTSHLILLKKVLRYLKGTVGGGILLKSGDVSMLQA 1272
L Y +TR D++++VN LSQF PR +H + K+L Y+KGTVG G+ S LQ
Sbjct: 385 LMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444
Query: 1273 FSDSNWGGCPDTRRSTSGYCVFLGSSLVSWSSKKQTTVSRSSTEAEYRALSLATSELLWM 1332
FSD+++ C DTRRST+GYC+FLG+SL+SW SKKQ VS+SS EAEYRALS AT E++W+
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504
Query: 1333 S 1333
+
Sbjct: 505 A 505
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 241 bits (616), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 118/228 (51%), Positives = 163/228 (71%), Gaps = 1/228 (0%)
Query: 1106 MVLLLYVDDIILTGTSDSLLDQLLAVLATEFAMKRLGHLHYFLGIEVSRKPSSLFLTQTK 1165
M LLLYVDDI+LTG+S++LL+ L+ L++ F+MK LG +HYFLGI++ PS LFL+QTK
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1166 YILELLDKSGLSDSKPSLVPISAGKKVSKLDGELIDNPIFYRSMVGGLQYATMTRPDLTY 1225
Y ++L+ +G+ D KP P+ K S + +P +RS+VG LQY T+TRPD++Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1226 SVNYLSQFMHEPRTSHLILLKKVLRYLKGTVGGGILLKSGDVSMLQAFSDSNWGGCPDTR 1285
+VN + Q MHEP + LLK+VLRY+KGT+ G+ + +QAF DS+W GC TR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 1286 RSTSGYCVFLGSSLVSWSSKKQTTVSRSSTEAEYRALSLATSELLWMS 1333
RST+G+C FLG +++SWS+K+Q TVSRSSTE EYRAL+L +EL W S
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase) |
ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 133 bits (335), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 92/139 (66%), Gaps = 10/139 (7%)
Query: 909 THSSSSIAEPKSYKTAIKDPKWKQAMEEEFQALLKNGTWSLIPRTTHMNVLGCKWVFKVK 968
T +++ EPKS A+KDP W QAM+EE AL +N TW L+P + N+LGCKWVFK K
Sbjct: 19 TITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTK 78
Query: 969 CHSDGSLQRYKARLVAQGYNQQEGIDYMETFSPVVKIQTIRVVLTLAISRHWPIQQLDVS 1028
HSDG+L R KARLVA+G++Q+EGI ++ET+SPVV+ TIR +L +A QQL+V
Sbjct: 79 LHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA-------QQLEVG 131
Query: 1029 ---NAFLHGHLTETIYMRQ 1044
N H + I+ ++
Sbjct: 132 QSINWMFKMHFSMGIFKKK 150
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 92.4 bits (228), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 1215 YATMTRPDLTYSVNYLSQFMHEPRTSHLILLKKVLRYLKGTVGGGILLKSGDVSMLQAFS 1274
Y T+TRPDLT++VN LSQF RT+ + + KVL Y+KGTVG G+ + L+AF+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 1275 DSNWGGCPDTRRSTSGYC 1292
DS+W CPDTRRS +G+C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79